| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0061 |
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| Symbol | |
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| ID | 3773778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 61366 |
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| End bp | 62472 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637798467 |
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| Product | CDP-glucose 4,6-dehydratase |
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| Protein accession | YP_399080 |
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| Protein GI | 81298872 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | [TIGR02622] CDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0769235 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTCTA GCTTTTGGCG CGATCGCCAA GTGCTGATCA CAGGGCATAC GGGCTTTAAG
GGAAGCTGGC TAACGCTTTG GTTATTGATG CAAGGGGCTG ATGTTTGGGG GTATGCCCTA
CCTCCAGAAT CCGAGCGATC GCTGTTTACA GCCTTGGACT TGGCGAACCA GCGGCAAGCG
GGTTGGGGTT ACTTTCAGTA TCGGCTCGGA GAGATGAATG ATGCTGAAGC TCTGAGGCAG
TGGGTAGAAC AAGCACAACC TGAGGTGGTG TTTCACCTAG CGGCTCAACC TTTAGTCCGT
CGAAGCTATG CCGATCCCTT GGGAACTTGG CAAACGAATG TTCTCGGTAG CCTGCAACTG
CTCGAAGCCC TAAAAAGTTT GCAGCACCCT TGCGCCATGG TGATGGTGAC AACAGATAAG
GTTTACGAAA ATCGTGAGTG GGTCTACGGC TATCGGGAGA CTGATTGCTT AGGAGGGCAT
GATCCCTACA GTGCCAGCAA AGCAGCGATG GAGTTAGCCG TGGCTAGTTG GCGATCGAGC
TTTTGTGGGG ATGCGGCTCA TCAAACGCCG TATTTAGCGA TCGCGACGGC GCGGGCAGGC
AATGTGATTG GCGGGGGAGA CTGGGCAGTC GATCGCATCG TGCCAGATGC GGTTCGGTCT
CTATCAGCCG GTGCTGCTAT TGCTGTTCGT AATTCCCACT CAACTCGACC TTGGCAGCAT
GTTTTGGAAC CGCTAGGAGG ATATCTACTG TTGGCGCAGC GACTGCTTGA ACATCAGCAG
TCTGCGGAGA AAACGGTGAA TCCGTTTGCG CGAGCTTTTA ACTTTGGCCC AGCAATAGAG
TCCAATCGTT CTGTGAAAGA GCTGATTACG ACAGTGCTTC AGCATTGGCC GGGACAGTGG
GTCGACCAAT CCGATCCAAC AGCTCCGCAC GAGGCTGGGC TATTGCATCT CGTCAGTGAC
CAAGCACGTC AGCTCCTGGG CTGGCAGCCT CGCTGGGATT TTGAAACAAC CGTCAGCAGA
ACGATCCATT GGTATCGACC GGTCATGATG ACAGGAGGCT CAGCATTGGA GGCTTGTCTT
GAGGACCTTG CTACTTACGG GCAGTGA
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| Protein sequence | MNSSFWRDRQ VLITGHTGFK GSWLTLWLLM QGADVWGYAL PPESERSLFT ALDLANQRQA
GWGYFQYRLG EMNDAEALRQ WVEQAQPEVV FHLAAQPLVR RSYADPLGTW QTNVLGSLQL
LEALKSLQHP CAMVMVTTDK VYENREWVYG YRETDCLGGH DPYSASKAAM ELAVASWRSS
FCGDAAHQTP YLAIATARAG NVIGGGDWAV DRIVPDAVRS LSAGAAIAVR NSHSTRPWQH
VLEPLGGYLL LAQRLLEHQQ SAEKTVNPFA RAFNFGPAIE SNRSVKELIT TVLQHWPGQW
VDQSDPTAPH EAGLLHLVSD QARQLLGWQP RWDFETTVSR TIHWYRPVMM TGGSALEACL
EDLATYGQ
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