Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0054 |
Symbol | |
ID | 3775767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 56423 |
End bp | 57190 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637798460 |
Product | hypothetical protein |
Protein accession | YP_399073 |
Protein GI | 81298865 |
COG category | [V] Defense mechanisms |
COG ID | [COG3510] Cephalosporin hydroxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000070397 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACTC CTCAAGAACT TGCATTTCAA GCTGAGAAGG CAACCTTAGT GGCACAGCAG GGCGAGAACC AAAAAGCTCG TGAGCTCGCC TTAGAATTTC TAAATGAAAC TGGAAATACA AAATATGCCT ACCACTTTTC TTGGATAAAC AGGCCAATAG TACAGCTACC TCAAGACATT GTCGCTTTTC AAGAAATTGT TTCCTCTGTT CAGCCAGACA TTATCATCGA AACAGGGGTT GCCCATGGTG GCTCCCTCGC TTTGTCGGCT TCACTGCTAT GCCTGCTAGA TGTTATGGAA GGCTTAAACC CGCGTCAGTC TAGCCGTAAA GTCATTGGTG TTGATATTGA GATTCGTCCC CACAATCGCA AGGCATTAGA TGAGCATCCC TTACGATTCA AGATGGAGCT CATTGAAGGA TCGTCGATCG ATCCCAAAAT TATTCAACAA GTAAAGAGTC ATGTACAAAG CTCAGAACGG GTCTTAGTAT CGCTCGACTC AAACCATACT CATGAGCATG TGATGGCTGA GCTAAATGCC TACGCTAGTT TAGTCACTGC AGGTAGCTAT TGTATCGTTT TTGATACTGT AATTGAAGAT TTACCAGCAG GCTCTTTTCC CGACCGGGCT TGGGATGTAG GCAATAATCC TAAAACTGCT GTGCACGAAT GGCTGAAGAG TCATCCTGAA TTTGCGATCG ATAAAGATAT TGATAACAAA CTACTGATCA GTGTTGCTCC AGATGGATAT CTAAAACGGA TTTTTTGA
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Protein sequence | MKTPQELAFQ AEKATLVAQQ GENQKARELA LEFLNETGNT KYAYHFSWIN RPIVQLPQDI VAFQEIVSSV QPDIIIETGV AHGGSLALSA SLLCLLDVME GLNPRQSSRK VIGVDIEIRP HNRKALDEHP LRFKMELIEG SSIDPKIIQQ VKSHVQSSER VLVSLDSNHT HEHVMAELNA YASLVTAGSY CIVFDTVIED LPAGSFPDRA WDVGNNPKTA VHEWLKSHPE FAIDKDIDNK LLISVAPDGY LKRIF
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