| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0051 |
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| Symbol | |
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| ID | 3775764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 52606 |
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| End bp | 54507 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637798457 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_399070 |
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| Protein GI | 81298862 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00284913 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACTC AGGACAACAG TTTGGCAGAA AATTATTACC AACAAGCGAT CGAGCAATGG
AAGTCTAGAG ATCAGAAACA AGCACTTCAA TTTTTTAAAA AAGCAGTGAG AGCAAAGCCA
AGTAATGCTC ATTATTGGTA TGCACTGGCT GGAACATACC ATATACAGAA CAAGTTTCGT
GCAGCTCGCT TTTGTTTTGA AAAGTCACTT AATTTAAATC CTAATCAAGA TGAAATCAAA
ATTTTTCTGT GCGAAATATG TTATTTACTA ACAGATTATA AATCTGTCGC TTATTATGCT
GGACAAGTAG ATTTGAGTAA AATTCAAAAT TTAGAGATCT TATATAAAGT TGCGTGCTCT
TTTAAAGAAC TTGGTCAGCT GGAGAAAACT GGTCAAGTCT GCTCTCAAAT TTTGTCATTA
GATGATAACT TTTGGCAGGC AAAACTACTT GCTGCTGAGA TACTAAGAAT AAAGGGTTAT
TCAGGAGAAG CTAAAGTATT AGTTTTAGAA TTAATAGACC AACAACCTAC CGTCGGTAAA
TTTTGGAATG AACTCGGTAT TAATGAAGTT GATCTAGCTC ATGAAGATGA AGCTTTATCC
GCATTTTCTA AAGCTGAGCA ATACGTATCT GGACCGGAGA AACTAATTAT AGGAAGTAAT
TATTTATTTG AATTTTCTAG TGGGCTTAGA ACAGCTAAAG ATATTTTAGA TGCACATTTA
CTTTGGAATA AAAAATATTG TAAAGATCAA GGTGGAAGTT TTCAATCAAG CAAGTTCAAT
TATTTAAAAT CAAATGATAA AAAAAACATT GCCTATCTCT CGGGTGATTT TAAAACACAT
TCCGTAAGTT ATTTCATTGA AGGAATTTTG GAGAATCACT CACGGGATGC GTTTAATATT
ATCTTGCTCT CGAATACTCA AGAGGATGAA AAGACAAAAA AATTTAAGGA GTTAGCAGAT
ATCTGGATTG ACTTAAAGTT AACTAATTTT GAAACAGCTG CTCAGATTGT TAAAAGGCTA
AATATTGATA TTCTTATTGA GCTTTCTGGA CATACAAATG GTAACAAACT GAATCTTTTA
AGTTCAAGAC TAGCACCGGT TCAAGCTACT TATCTTGGCT ACTTTGCTAC AACAGGATTA
TCAACAATAG ATTATTGGAT AACAGACAAT GTTGTTCACC CTGCTCACAC TGTAGAGTTA
GCAACAGAAA CTATTTTTCG ACTACCACGG TGCTACTTGG CTTACACGCC ACCACCTCAA
TCACCTAGTA TCGCAGAGTC TCCAGTTATT AAAAATGGAT ATATTACATT TGGCTCTTTC
GTTGCAAGTC GAAAGATTAG TGACTATTCA ATCCTACTGT GGTCTTCTAT CTTAAGTGAG
ATTCCGAATA GTCAGCTTTT AATTAAGAAC CGAAGTTGCG TTAGCCCATT GTACCGCTCT
GAGCTAATAG AAAAGTTTTC ACTCTGTGGC ATTAGTTCTC AGCGAATTAA CTTCAACGAG
GCTAAATTGA ACTTAGAAGA TCATCTTGCA CTGTATAACA AGGTTGATAT TGCACTTGAT
ACCTATCCAG CGAGTGGCTG TACAACCACT GTCGAAGCAC TCTGGATGGG TGTCCCAGTC
TTAACTCGCC TTGGTGAATT AATGGTTAGC CGTAATAGTG CTTCTTTGCT CCATGCACTC
AATCTCCAAA ATTGGATTGC AGAAACAGAT GAAGAATACA TTGATAAGGG TATCAAATTT
ACTCAATCCA TCGAACAGCT TGCCCTGTTA AGACAGGGTA TGAGAGAGCG ATTTATGCAG
TCTGAACTCT ATGATTCTAG GGGTCTCACC CTCCACCTAG AAGACTTTTA TCTAAAAGCC
TTACAGGAGA AGTTGAGCGC CAATAAAGAA GTTAGATTTT GA
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| Protein sequence | MSTQDNSLAE NYYQQAIEQW KSRDQKQALQ FFKKAVRAKP SNAHYWYALA GTYHIQNKFR
AARFCFEKSL NLNPNQDEIK IFLCEICYLL TDYKSVAYYA GQVDLSKIQN LEILYKVACS
FKELGQLEKT GQVCSQILSL DDNFWQAKLL AAEILRIKGY SGEAKVLVLE LIDQQPTVGK
FWNELGINEV DLAHEDEALS AFSKAEQYVS GPEKLIIGSN YLFEFSSGLR TAKDILDAHL
LWNKKYCKDQ GGSFQSSKFN YLKSNDKKNI AYLSGDFKTH SVSYFIEGIL ENHSRDAFNI
ILLSNTQEDE KTKKFKELAD IWIDLKLTNF ETAAQIVKRL NIDILIELSG HTNGNKLNLL
SSRLAPVQAT YLGYFATTGL STIDYWITDN VVHPAHTVEL ATETIFRLPR CYLAYTPPPQ
SPSIAESPVI KNGYITFGSF VASRKISDYS ILLWSSILSE IPNSQLLIKN RSCVSPLYRS
ELIEKFSLCG ISSQRINFNE AKLNLEDHLA LYNKVDIALD TYPASGCTTT VEALWMGVPV
LTRLGELMVS RNSASLLHAL NLQNWIAETD EEYIDKGIKF TQSIEQLALL RQGMRERFMQ
SELYDSRGLT LHLEDFYLKA LQEKLSANKE VRF
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