| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0045 |
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| Symbol | |
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| ID | 3775758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 43572 |
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| End bp | 44927 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637798451 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_399064 |
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| Protein GI | 81298856 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.717523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGTTGC AGCAGTGGGC TGAACAGGCC GCGAGTCAAC AAGACTGGTC AACAGCGCTG
CAACTGATTG AATTGGCCGC TTGGCAGGAA CCCGACAATC CTCAGATTTT GTGCCGGTGG
GGAGATTGGT TAGCAGCGGC TGGACAACCT GAAGAAGCGA TCGCGGCTTA TCAAGCAGTA
CTAGAGTTCC AGCCCGGTTG CCCTCAGTCG ATCGCAGCTT GGGCGGCTGT TCTCAATGAG
CAAGGTCAAT TTGCTGAAGC GATCGCTCTG CTCGATCAGG CTTCAGAACA AACGGCAGAC
CTCTGGCATC AGCGAGCTGT TGCCTTACAG AGTTTGGGGG ACTGGCCACA GGCTTTAACG
AGTTGCGATA GCGCTTTGCA ACTCGATCCG ACAGCCGCTG AGTCGCAGTT CCTGCGCAGT
AAGTTGCGGT TAGGTCTGGG CGATTGGTCG CAAGGTTGGC CAGAGTATGA GAGTCGGTTG
CTGGTGTTTT CAGAGCTACG CGATCGCCTC CCCAGTTTTG GTTGCCCCCT CTGGCAAGGC
GAGGATCTCA CTAATAAAAC GCTATTGATT TGGGGCGAAC AAGGTTACGG CGATCAAATT
CAGTTTGTCC GCTACTTATC TGTCTTGCAC GATCGCTGGC CAGAAACACC GCTCTTATTA
CTCGTTAGTG AGCCATTGGT CGATTTATTC CGACAATTGG CGATCGCTAA TCTACAAGTT
GCTACCCAAT TCACTTTTGA GACTGAATCA GCCTACGACT TTCATCTGCC ACTGTTGTCA
TTGCCTGAAC GACTCGGTGC CACGGCTGAC GTAATTCCAC TCGCTCAGGG ATATCTGCCG
CGATCGCTGC AATCTGAGAT CAGACTCCAA GCCAATCCTC GTCAGCTGCA GGTTGGCTTT
GTTTGGCAGG CTGGAGAGAC CAGCGATCGC CGCTATCAAT GGCGACAAGC TAGTAAAAGT
GTGCCGCTAG AGCAATTTCT TCAGTTGCGA TTGCAGGTGA ATCATTGTCA GTTTTGGAGC
CTGCAAGTAG GCCCGGCTCG TCAATCACTC CTCCAGAACT GGGATTGGGC AGACTGTGAT
CTCGCTGATC GAATGCACTC ATTTGCCGAT ACTGCCGCTG TACTCAATCA GATGGATCTC
CTGATTACAG TGGATACTGC GATCGCGCAT TTGGCAGGTG CTTTGGAGAT TCCGACTTGG
CTGCTTCTGC CCAAATTCGC AGATTGGCGC TGGAGTCTGA CTGGGTCAGA AACCCCTTGG
TATCAATCAA TGCGGCTCTA TCGGCAGGCG ATTGCTGGGG ATTGGCGATC GGTCTTTGAG
CAACTGCAGC AGGATTTGAA TTCTAGACCC TACTAG
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| Protein sequence | MQLQQWAEQA ASQQDWSTAL QLIELAAWQE PDNPQILCRW GDWLAAAGQP EEAIAAYQAV
LEFQPGCPQS IAAWAAVLNE QGQFAEAIAL LDQASEQTAD LWHQRAVALQ SLGDWPQALT
SCDSALQLDP TAAESQFLRS KLRLGLGDWS QGWPEYESRL LVFSELRDRL PSFGCPLWQG
EDLTNKTLLI WGEQGYGDQI QFVRYLSVLH DRWPETPLLL LVSEPLVDLF RQLAIANLQV
ATQFTFETES AYDFHLPLLS LPERLGATAD VIPLAQGYLP RSLQSEIRLQ ANPRQLQVGF
VWQAGETSDR RYQWRQASKS VPLEQFLQLR LQVNHCQFWS LQVGPARQSL LQNWDWADCD
LADRMHSFAD TAAVLNQMDL LITVDTAIAH LAGALEIPTW LLLPKFADWR WSLTGSETPW
YQSMRLYRQA IAGDWRSVFE QLQQDLNSRP Y
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