Gene Synpcc7942_0035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0035 
Symbol 
ID3775848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp34357 
End bp35115 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content48% 
IMG OID637798440 
Producthypothetical protein 
Protein accessionYP_399054 
Protein GI81298846 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTAA AGCGACTGAT TGCAGCACTT ACAGTTCTGC TGTTAGCGGC TTGTCAACCG 
GATAGCCGCC TCAGTGAAAC GCCACCAGTG GCAGAGCTGG CAACAGTGAT TTCCGTAACG
GTGGGTCCTT ATCACTTGCG TCTCCCTTTA GTGGCAATCA CTTGGGCAGG AAGATCTAAA
GTGTCGCAGC CTTGTGAGGA AGAAAAATCC CAGCGATTGT GTTCTGTGCC GATGGAAACA
CTTGTGGAAT CTGCACAAAA GGAAAGGGCG ATCGCGGCAA GCAGCCTTGA GATTCTGCTG
GATGACTACA GCACCTTTAA GAATTTGAAG CTCGATCGCT GGTTTGATAT TCCACAACTT
TGTGAACAAC TCACTCAGCG CTGGGCACGT CAGCAGTGCA CTGGGCCGTC TTTGTTTCAG
GACAACCTGC GAAGGTTCAC TCTCATTAAG CAGGAGTCGC TACCAAGGGT TAACAGTCTA
GGTTTGATTG GGGGACAGAA GGAGCCGATC AGACAGGTAG TTCAGAGGAT GGAGTTTATT
GGCGATGATC CGACAGCTGA TTGTGCAGAT GATGGTCAGG GTCTCTGCAC AGTAGCTATG
CAACTTGAAG GAAATGTCCT CGCCATCTGG GTTGTTGCGA TCGCGGATGT TAATTCAATT
CAAAGACAAG CGATCACAAT TCGAGCTTTT TTGAAGTATG CGGCAGGGAA AGAAGAGAAC
TACAAGATAT TAGAAGCAGC GTTATCTATC AATAATTAA
 
Protein sequence
MELKRLIAAL TVLLLAACQP DSRLSETPPV AELATVISVT VGPYHLRLPL VAITWAGRSK 
VSQPCEEEKS QRLCSVPMET LVESAQKERA IAASSLEILL DDYSTFKNLK LDRWFDIPQL
CEQLTQRWAR QQCTGPSLFQ DNLRRFTLIK QESLPRVNSL GLIGGQKEPI RQVVQRMEFI
GDDPTADCAD DGQGLCTVAM QLEGNVLAIW VVAIADVNSI QRQAITIRAF LKYAAGKEEN
YKILEAALSI NN