Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0019 |
Symbol | |
ID | 3774239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 18615 |
End bp | 20489 |
Gene Length | 1875 bp |
Protein Length | 624 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637798424 |
Product | sulfite reductase subunit beta |
Protein accession | YP_399038 |
Protein GI | 81298830 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
TIGRFAM ID | [TIGR02042] ferredoxin-sulfite reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.508034 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCCGA CTGCTGCACC CCAAAAGCTT TCTAAAGTTG AAGACCTCAA GGCACGCAGT CAGTACCTGC TGGAGCCGAT TCTAAGCCAG CTCCAGGAAG AGTCGACTCA CTTTAATGAA GACGGGATCC AGATCCTTAA ATTCCACGGT TCCTATCAGC AAGACAACCG CGACAACCGC GTCAAGGGGC AGGAAAAAGA CTTTCAGTTC ATGCTGCGCC TGCGCAGTCC CGGCGGCTAC ATTCCGCCAC AGCTCTATCT CACCCTTGAT CAACTGGCCG ATGACTATGG CAACGGCACC CTGCGAGCAA CGACGCGCCA AGCCTTTCAG TTGCACGGTA TTCTCAAGCG CGACCTGAAA ACGGTGATCC GTCGGATTGT CGAAAACCTG GGCTCGACGA TCTCCGCTTG CGGCGATGTC AATCGCAACG TCATGGCACC GCCAGCACCC TTCCGCGATC GCCCGGAATA TGAGTGGGCG CGCACCTACG CTAACAACAT TGCTGACTTG CTGACGCCGG AGTCTGGCGC CTATTACGAA CTCTGGCTGG ATGGTGAAAA AGTCCTGAGT GGTGAACCGG ATCCAGCGGT ACTAGCAGCC CGCCGCAATC CTAAAGGCCG TGTAGCCGAT TCTGTCGAAC CGCTCTACAG CGATCGCTAT CTGCCGCGCA AATTCAAGAT TGCGGTCACG GTTCCCGGCG ACAACTCAAT TGACCTGTTC ACCCAGGACA TTGGCTTAGT CGTGATTGGC AATGATCGCG GCGAACTAGA GGGTTTCAAC GTCTACGTCG GTGGCGGCAT GGGTCGCACC CACAACAAAG AGGAAACCTT TGCGCGGCTA GCGGATCCCC TCGGCTTTGT GCCTGCAGCT GATATCTATG CTGCTGTGCA GGCGATCGTG GCGACCCAGC GGGACTACGG CGATCGCAGC AACCGTCGCC ATGCCCGCAT GAAGTACCTG ATCCACGATT GGGGCATCGC CAAATTTAAA GAAGCTGTCG AATCCGTTTT CGGTAAAGCG ATCGCCCCTG TGCGCGAACT GCCGCCCTTC CGCTATCGCG ACTATCTCGG CTGGCATGAG CAGGGCGATG GCAAGTGGTT CTTGGGTCTA CCGATCACCA GTGGCCGGAT TAAAGATGAC GGTAATTGGC AACTGCGATC GGCTTTGCGG GAGATCGTCA GCCGTTGGCA ACTACCGCTG TTGCTGACCG GCAGCCAAGA CGTCTTGATC TACGATGTTC AGCCTGGCGA TCGCGCTGCG ATTGATAAAC TCCTCCGCGA TCGCGGAGTT CATACGGTTG AGGCGATCGA CTCCCTGCAG CGCTACGCGA TGGCCTGCCC TGCCTTGCCA ACCTGCGGTC TGGCGATTAC GGAATCGGAG CGAGCCTTGC CGGGACTATT GGTGCGGATC CGTCGCCTCC TGGAAGAGCA AGGGTTGCCC GATGAGCATT TCGTGGTGCG GATGACTGGT TGTCCCAATG GTTGTGCTCG TCCCTACATG GCGGAACTGG CCTTTGTGGG TAGTGCACCG AATACCTACC AGCTCTGGCT AGGGGGGTCG CCAGATCAAA CCCGCTTGGC TCGACCCTTC ATCGATCGCT TAGCGGATGG CGATGTAGAA ACCCAACTAC GACCGCTGTT TGTCTTCTTC AAACAGAGTC GGCAAGCGGG CGAAAGTTTT GGTGATTTCT GCGATCGCGT CGGCTTCGAC GCCCTGCGTC AGTTTAGTGA AAGCTACCAG CACGAAGCAG CCAAACCCCG CTATCGGGTA GGTCTACGGG CGGATGTGCA CGGTCGTCTG AAAGCCGAAG CCGACAAACG TGGCGTCTCG CTGACTGACC TGGCCTGTGA GGCGATCGCC GCCTACCTGC GCTAA
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Protein sequence | MSPTAAPQKL SKVEDLKARS QYLLEPILSQ LQEESTHFNE DGIQILKFHG SYQQDNRDNR VKGQEKDFQF MLRLRSPGGY IPPQLYLTLD QLADDYGNGT LRATTRQAFQ LHGILKRDLK TVIRRIVENL GSTISACGDV NRNVMAPPAP FRDRPEYEWA RTYANNIADL LTPESGAYYE LWLDGEKVLS GEPDPAVLAA RRNPKGRVAD SVEPLYSDRY LPRKFKIAVT VPGDNSIDLF TQDIGLVVIG NDRGELEGFN VYVGGGMGRT HNKEETFARL ADPLGFVPAA DIYAAVQAIV ATQRDYGDRS NRRHARMKYL IHDWGIAKFK EAVESVFGKA IAPVRELPPF RYRDYLGWHE QGDGKWFLGL PITSGRIKDD GNWQLRSALR EIVSRWQLPL LLTGSQDVLI YDVQPGDRAA IDKLLRDRGV HTVEAIDSLQ RYAMACPALP TCGLAITESE RALPGLLVRI RRLLEEQGLP DEHFVVRMTG CPNGCARPYM AELAFVGSAP NTYQLWLGGS PDQTRLARPF IDRLADGDVE TQLRPLFVFF KQSRQAGESF GDFCDRVGFD ALRQFSESYQ HEAAKPRYRV GLRADVHGRL KAEADKRGVS LTDLACEAIA AYLR
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