Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0018 |
Symbol | glyS |
ID | 3774238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 16206 |
End bp | 18392 |
Gene Length | 2187 bp |
Protein Length | 728 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637798423 |
Product | glycyl-tRNA synthetase subunit beta |
Protein accession | YP_399037 |
Protein GI | 81298829 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.606807 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGGCCT TTCTACTAGA AGTCGGAACC GAAGAACTCC CTGCTTCTTT TGTAGCCGCT GCGATCGCGC AATGGCAGAA CTGGCTGCCG ACTCGCTTGG CAGAGGCCCA GCTGACGACC ACCCAGATTT CAGTCTACGG AACGCCGCGC CGCTTGGCCG TGCTGATCGA GGGCCTGCCC GATCGCCAGC CCGATCGCGA AGAAGAAGTG AAAGGGCCAC CGGCCAGCGC TGCCTTTAAA GATGGCGAAC CAACCCCCGC CGCGATCGGG TTTGCCCGTA AGCAAGGGGT TGAAGTCAGT GACTTCACGG TGCGGGAGAC AGACAAAGGG GCTTTTGTCT TTGTCCAAAA GCGGGAAGTG GGGCAACCGC TGGCGGACGT CCTGCAATCG CTCGTTCCCA GTTGGATTCA AGACCTCGAA GGCAAGCGCT TTATGCGCTG GGGCGATGGT GATCTACGCT TTTCACGGCC GATTCGCTGG TTAGTTGCGC TGATTGATGA CCAAGTCCTG CCCTTGGAAC TGACCAGCGG CGGCAGCACC GTGCAGAGCG ATCGCCTCTC GCGGGGGCAT CGGGTTTTAC ATCCAGAACC TGTGGCGATC GCCCAAGCCA GTGATTATCT GGCGACGCTC GAAGCAGCCA GCGTCCTCGT TGATCCGGCT CAGCGTCAAG CCAAGATTGA AGCTCAAACG GCGGCGATCG CCTCTAAAGT CGGCGGTCAA GCTGAACTGC CAGAAGACTT GCTAGCAGAA GTGGTGCATC TGACCGAGTG GCCAACCGCC GTCTTGGGTC AGTTTGAAGA GCGTTTCCTC AGCCTGCCAG CCGAAGTTTC AACGATGGTG ATGACCAGTC ACCAGCGCTA TTTCCCGATT TACCAAGCCA CAGCGCAGCG CGATCCGGCG GCCATCGATG CGCGATCGGA GCTGTTGCCC TGTTTCGTCA CGATTTCCAA TGGCGATCCG GCGGCCAGTG AGACGATTGC TGCTGGCAAT GCCCGCGTAA TTCGGGCGCG GTTAGCAGAT GGGGAGTACT TCTATCGCAC CGATAGCAAG CAGCCGCTCG AAAGTTTCCT CAGTCAACTA GAAGCGGTGA CCTTCCAAGA GCAGTTGGGT TCGGTGCGCA GCAAAGTCGA TCGCATTGGG GCGATCGCCC ACCGACTCTG CGATCAACTC AGCATCCACT CCAGCGATCG CCTGTTGGTT TCGCGGGCTG CTCAGCTCTG CAAAGCCGAC CTCGTCAGCC AAATGGTCTA CGAATTTCCG GAACTGCAGG GCGTGATGGG CGAAAAATAC GCCCGCGTTA GTCAGGAGCC GGATGCGGTT GCTACGGCGA TTCGCGAGCA CTATCTGCCC AAGGGCGCGG GTGATCAACT GCCCCAAACC CTGACTGGCC GCATGGTTGC CTTGGCCGAT CGCCTCGACA CCTTGGTCTG CATCTTCGGT CTGGGACTGC TGCCCAGTGG ATCTTCCGAT CCTTTTGCCC TGCGTCGTGC CGCCAATGGC GTCCTCAATA TCCTCTGGGA TGGGCAACTG CGCCTTGACC TGACGGCCTT GATCCAAGGC ATCGCTGCGG ACTTCCACCA TGCTTTCCCG AAACTGGCGG GCAATGCTGA AACCTTGATT CAACAGTTGA CCGACTTCTT TGGTCAGCGG CTGCGCACCT TGCTCCAAGA TGAGCAGGGC ATTGATTACG ACCTCGTCAA CGCAGTGCTA GGCGACGGAG ATGCTAACTA TCTCCTCCGA GCGATCGCAG ATCCTTTGGA TGCCCTGAAT CGGGCCAAAC TACTGCAAAC CCTGCGGCAG GACGGTCGTT TGGTTGCACT GTATGAAACG GTCAACCGCG CCACTCGCTT AGCTAGCAAA GGCGATCTTG ATACAGCGAC CTTAGATCCC ACGGGCTTAG TCAACGCCGA TCTATTCCAG CAGCCGAGTG AGGCAGCCTT CCTGTCGGCT CTGACGACGC TGCAACCTTT AGCGACTGCG GCTCAAGCTA GCCAAGCCTA TGAACCTTTG GTGGAGGGTT TGCTGACGGC AGCGCCTGCG GTGCAATCCT TCTTTGATGG CGACACCAGC GTGCTGGTCA TGGATCCTGA TCCGGCCATT CAGCAAAATC GCCTCAACTT GTTGGGACTG TTGCGCAATC AAGCCCGTGT GCTGGCTGAT TTTGGAGCGA TCGTCAAAGG TGAGTAG
|
Protein sequence | MPAFLLEVGT EELPASFVAA AIAQWQNWLP TRLAEAQLTT TQISVYGTPR RLAVLIEGLP DRQPDREEEV KGPPASAAFK DGEPTPAAIG FARKQGVEVS DFTVRETDKG AFVFVQKREV GQPLADVLQS LVPSWIQDLE GKRFMRWGDG DLRFSRPIRW LVALIDDQVL PLELTSGGST VQSDRLSRGH RVLHPEPVAI AQASDYLATL EAASVLVDPA QRQAKIEAQT AAIASKVGGQ AELPEDLLAE VVHLTEWPTA VLGQFEERFL SLPAEVSTMV MTSHQRYFPI YQATAQRDPA AIDARSELLP CFVTISNGDP AASETIAAGN ARVIRARLAD GEYFYRTDSK QPLESFLSQL EAVTFQEQLG SVRSKVDRIG AIAHRLCDQL SIHSSDRLLV SRAAQLCKAD LVSQMVYEFP ELQGVMGEKY ARVSQEPDAV ATAIREHYLP KGAGDQLPQT LTGRMVALAD RLDTLVCIFG LGLLPSGSSD PFALRRAANG VLNILWDGQL RLDLTALIQG IAADFHHAFP KLAGNAETLI QQLTDFFGQR LRTLLQDEQG IDYDLVNAVL GDGDANYLLR AIADPLDALN RAKLLQTLRQ DGRLVALYET VNRATRLASK GDLDTATLDP TGLVNADLFQ QPSEAAFLSA LTTLQPLATA AQASQAYEPL VEGLLTAAPA VQSFFDGDTS VLVMDPDPAI QQNRLNLLGL LRNQARVLAD FGAIVKGE
|
| |