Gene Synpcc7942_0015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0015 
Symbol 
ID3774235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp13577 
End bp14248 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content55% 
IMG OID637798420 
Productputative hydroxylase 
Protein accessionYP_399034 
Protein GI81298826 
COG category[S] Function unknown 
COG ID[COG3128] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.587927 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.457656 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTATCA CGATCGATGC CTTGCTCGAC GCCGCTCAGC TCAACAAGAT CCAAAGCAGC 
TTACAAACAG CTGAGTTTAT CGATGGCCGC GCGACAGCCG GCTGGCATGC ACAGCTAGTC
AAGCAAAATC AGCAGCTCTC CCGCACCAGT ACTTTAGCGA AGAGTTTGCA AGAGATAGTG
CAAACGGCAC TACAGAATAA TGCCCTCTTT GAGGCAGCAG CCTATCCCCA GCGTGTTCAC
AGCCTGTTGT TTAGTCGCTA TGAACCTGGC ATGGAGTATG GTCGCCATGT GGATAATGCT
CTGATGGGAA GTGGCGATCG CCGTGATCGG GCTGACTTAT CCTTCACTTT GTTTTTGAGC
GATCCCGACC GCTACATCGG TGGAGCTCTA GTGATTGAAG GGGCCTGCGA TGAACAGGCC
TATCGGTTGC CCGCCGGATC GTTGCTGCTC TATCCCTCAT CCACCCTGCA CCGTGTTGAT
CCCGTTGAGC AAGGCTACCG CTTTGCCTGC GTGGGCTGGG TGCAAAGTTG GATCCGCGAC
CCTGCTAAGC GGGAACTGCT GTTTGACCTC GATACAGCTC GGCGATCGCT GTTTACCCGC
GAGGGCAAGA GCATTGAGTT TGACCTGCTT TCAAAAACCT ATGCCAACCT GCTGCGACGC
TGGTCAGAGT AG
 
Protein sequence
MIITIDALLD AAQLNKIQSS LQTAEFIDGR ATAGWHAQLV KQNQQLSRTS TLAKSLQEIV 
QTALQNNALF EAAAYPQRVH SLLFSRYEPG MEYGRHVDNA LMGSGDRRDR ADLSFTLFLS
DPDRYIGGAL VIEGACDEQA YRLPAGSLLL YPSSTLHRVD PVEQGYRFAC VGWVQSWIRD
PAKRELLFDL DTARRSLFTR EGKSIEFDLL SKTYANLLRR WSE