Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0015 |
Symbol | |
ID | 3774235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 13577 |
End bp | 14248 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637798420 |
Product | putative hydroxylase |
Protein accession | YP_399034 |
Protein GI | 81298826 |
COG category | [S] Function unknown |
COG ID | [COG3128] Uncharacterized iron-regulated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.587927 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.457656 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTATCA CGATCGATGC CTTGCTCGAC GCCGCTCAGC TCAACAAGAT CCAAAGCAGC TTACAAACAG CTGAGTTTAT CGATGGCCGC GCGACAGCCG GCTGGCATGC ACAGCTAGTC AAGCAAAATC AGCAGCTCTC CCGCACCAGT ACTTTAGCGA AGAGTTTGCA AGAGATAGTG CAAACGGCAC TACAGAATAA TGCCCTCTTT GAGGCAGCAG CCTATCCCCA GCGTGTTCAC AGCCTGTTGT TTAGTCGCTA TGAACCTGGC ATGGAGTATG GTCGCCATGT GGATAATGCT CTGATGGGAA GTGGCGATCG CCGTGATCGG GCTGACTTAT CCTTCACTTT GTTTTTGAGC GATCCCGACC GCTACATCGG TGGAGCTCTA GTGATTGAAG GGGCCTGCGA TGAACAGGCC TATCGGTTGC CCGCCGGATC GTTGCTGCTC TATCCCTCAT CCACCCTGCA CCGTGTTGAT CCCGTTGAGC AAGGCTACCG CTTTGCCTGC GTGGGCTGGG TGCAAAGTTG GATCCGCGAC CCTGCTAAGC GGGAACTGCT GTTTGACCTC GATACAGCTC GGCGATCGCT GTTTACCCGC GAGGGCAAGA GCATTGAGTT TGACCTGCTT TCAAAAACCT ATGCCAACCT GCTGCGACGC TGGTCAGAGT AG
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Protein sequence | MIITIDALLD AAQLNKIQSS LQTAEFIDGR ATAGWHAQLV KQNQQLSRTS TLAKSLQEIV QTALQNNALF EAAAYPQRVH SLLFSRYEPG MEYGRHVDNA LMGSGDRRDR ADLSFTLFLS DPDRYIGGAL VIEGACDEQA YRLPAGSLLL YPSSTLHRVD PVEQGYRFAC VGWVQSWIRD PAKRELLFDL DTARRSLFTR EGKSIEFDLL SKTYANLLRR WSE
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