Gene Synpcc7942_B2664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_B2664 
Symbol 
ID3772773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007595 
Strand
Start bp7246 
End bp8235 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content56% 
IMG OID637798365 
Productcysteine synthase 
Protein accessionYP_398713 
Protein GI81230383 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0031] Cysteine synthase 
TIGRFAM ID[TIGR01136] cysteine synthases
[TIGR01139] cysteine synthase A 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.211268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.363932 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACTT CTGGAACCTT TTTTGCTGAT AATAGCCAAA CCATCGGCAA GACCCCTTTG 
GTTCGCCTTA ATCGAATTGT GAAAGGGGCT CCTGCAACAG TTTTGGCGAA AATTGAAGGG
CGTAATCCCG CCTATTCCGT TAAATGTCGG ATTGGTGCAG CCATGATTTG GGATGCAGAG
CAGCGAGGCT TGCTCGGCCC CGGTAAGGAA TTGATTGAAC CCACTAGTGG TAATACCGGC
ATTGCCTTAG CGTTTGTGGC CGCAGCGCGG GGGATTCCAC TCACCCTGAC GATGCCAGAA
ACGATGAGCT TGGAACGTCG CAAGTTGCTG GCGGCCTATG GGGCCAAGTT GGTGCTGACC
GAAGGCGTCA AGGGCATGAC CGGAGCCGTG CGGCGAGCCG AAGACATTGC GGCCTCAGAT
CCTGATCGCT ATGTGTTGCT GCAGCAGTTC CGTAACCCGG CCAATCCAGC GATTCATGAG
CAGACGACAG GGCCAGAAAT TTGGGAGGAC ACTGGCGGCG CGATCGATAT TTTGGTTTCC
GGCGTTGGCA CAGGTGGCAC GATTACGGGC GTCTCGCGCT ACATCAAGCA AACCCAAGGC
AAGCCCATTC TGTCTGTAGC AGTGGAACCT GAAGCCAGTC CGGTGATTAG CCAACAGCGA
TCGGGGTTGC CGCTGAAACC AGGGCCGCAC AAGATTCAAG GCATTGGGGC AGGGTTCATC
CCTGAAAACC TGGATCTGTC GCTGGTCGAT CAGGTAGAGC GAGTTTCCAA TGAAGAAGCG
ATCGCCTATG CCCGGCGCCT TGCTCAAGAG GAAGGACTGA TTTCGGGGAT TTCCTGTGGT
GCTGCCGTGG CAGCGGCAGT TCGGCTAGCC CAGCAATCAG AACATGCGGG CAAAACGATC
GTGGTAGTGT TGCCCGATTC CGGTGAGCGC TATCTCAGTA CGGCTTTGTT CGACGGCATT
TTCAATGAGC AGGGGCTGGC CGTTGTATGA
 
Protein sequence
MSTSGTFFAD NSQTIGKTPL VRLNRIVKGA PATVLAKIEG RNPAYSVKCR IGAAMIWDAE 
QRGLLGPGKE LIEPTSGNTG IALAFVAAAR GIPLTLTMPE TMSLERRKLL AAYGAKLVLT
EGVKGMTGAV RRAEDIAASD PDRYVLLQQF RNPANPAIHE QTTGPEIWED TGGAIDILVS
GVGTGGTITG VSRYIKQTQG KPILSVAVEP EASPVISQQR SGLPLKPGPH KIQGIGAGFI
PENLDLSLVD QVERVSNEEA IAYARRLAQE EGLISGISCG AAVAAAVRLA QQSEHAGKTI
VVVLPDSGER YLSTALFDGI FNEQGLAVV