Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_B2662 |
Symbol | |
ID | 3772771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007595 |
Strand | - |
Start bp | 5275 |
End bp | 6195 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637798363 |
Product | major membrane protein I |
Protein accession | YP_398711 |
Protein GI | 81230381 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.0668871 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.653336 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGATA ACGCCCCGCA GTTAGCGTTG CGTGATGTTG CTGCACGCCA GTTAGCCAAC GCGACCAAAA CCGTTCCGCA GCTTCGCACC ATTACCCCCC GGTGGTTGGT GCGGCTGTTG CACTGGACGC CAGTGGAAGC GGGTATCTAC CGCGTCAACC AAGTTAAAGA CGCTTCGCAG ATTACGGTGG CCTGCTCGGA ACGAGATGAG TCAGAGCTGC CCGAAACCTT TGTCGATTAC ATCGATAATC CCCGCGAGTA TTTGCTCAGC GCCGTCAATA CGGTAGTGGA TGTCCATACC CGCATCTCAG ATCTATACAG CAATCCCCAC GATCAAATCC GTGAGCAGTT GCGGCTGACG ATCGAGATTA TGAAGGAGCG GCAGGAAAGC GAGCTGATCA ATAGCCGCGA ATATGGACTG CTGAATAATG TGGCACCAGG GCAATTAGTC CACACCCGCA ATGGTGCACC AACACCAGAT GATCTGGATG AGCTCTTGAT TCGCGTTTGG AAAGAGCCGG CCTTTTTCCT GGCTCATCCG CAGGCGATCG CAGCTTTTGG TCGGGAATGC ACACGCCGAG GAGTTCCGCC TGCCACGGTT TCTCTGTTCG GCTCCTCATT CATCACTTGG CGAGGCGTGC CACTGATTCC GTCGGACAAA GTGCCACTGG AGAATGGCAA GACCAAAATC CTGCTCCTGC GTGTGGGGGA AAGTCGGCAG GGCGTTGTGG GTCTTTATCA ACCCAATCTG CCGGGTGAGC AGGGCATGGG TTTATCGGTA CGTTTTATGG GCATTAATCG CAAAGCCTTA GCCAGCTATT TGGTGTCGCT CTACTGCTCG CTGGCGGTGC TGACGGACGA TGCGTTAGCG GTGCTGGACA ACGTCGATGT CACTCAGTAC CACACCTATC GCTACAACTA A
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Protein sequence | MTDNAPQLAL RDVAARQLAN ATKTVPQLRT ITPRWLVRLL HWTPVEAGIY RVNQVKDASQ ITVACSERDE SELPETFVDY IDNPREYLLS AVNTVVDVHT RISDLYSNPH DQIREQLRLT IEIMKERQES ELINSREYGL LNNVAPGQLV HTRNGAPTPD DLDELLIRVW KEPAFFLAHP QAIAAFGREC TRRGVPPATV SLFGSSFITW RGVPLIPSDK VPLENGKTKI LLLRVGESRQ GVVGLYQPNL PGEQGMGLSV RFMGINRKAL ASYLVSLYCS LAVLTDDALA VLDNVDVTQY HTYRYN
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