Gene Synpcc7942_B2662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_B2662 
Symbol 
ID3772771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007595 
Strand
Start bp5275 
End bp6195 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content55% 
IMG OID637798363 
Productmajor membrane protein I 
Protein accessionYP_398711 
Protein GI81230381 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.0668871 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.653336 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATA ACGCCCCGCA GTTAGCGTTG CGTGATGTTG CTGCACGCCA GTTAGCCAAC 
GCGACCAAAA CCGTTCCGCA GCTTCGCACC ATTACCCCCC GGTGGTTGGT GCGGCTGTTG
CACTGGACGC CAGTGGAAGC GGGTATCTAC CGCGTCAACC AAGTTAAAGA CGCTTCGCAG
ATTACGGTGG CCTGCTCGGA ACGAGATGAG TCAGAGCTGC CCGAAACCTT TGTCGATTAC
ATCGATAATC CCCGCGAGTA TTTGCTCAGC GCCGTCAATA CGGTAGTGGA TGTCCATACC
CGCATCTCAG ATCTATACAG CAATCCCCAC GATCAAATCC GTGAGCAGTT GCGGCTGACG
ATCGAGATTA TGAAGGAGCG GCAGGAAAGC GAGCTGATCA ATAGCCGCGA ATATGGACTG
CTGAATAATG TGGCACCAGG GCAATTAGTC CACACCCGCA ATGGTGCACC AACACCAGAT
GATCTGGATG AGCTCTTGAT TCGCGTTTGG AAAGAGCCGG CCTTTTTCCT GGCTCATCCG
CAGGCGATCG CAGCTTTTGG TCGGGAATGC ACACGCCGAG GAGTTCCGCC TGCCACGGTT
TCTCTGTTCG GCTCCTCATT CATCACTTGG CGAGGCGTGC CACTGATTCC GTCGGACAAA
GTGCCACTGG AGAATGGCAA GACCAAAATC CTGCTCCTGC GTGTGGGGGA AAGTCGGCAG
GGCGTTGTGG GTCTTTATCA ACCCAATCTG CCGGGTGAGC AGGGCATGGG TTTATCGGTA
CGTTTTATGG GCATTAATCG CAAAGCCTTA GCCAGCTATT TGGTGTCGCT CTACTGCTCG
CTGGCGGTGC TGACGGACGA TGCGTTAGCG GTGCTGGACA ACGTCGATGT CACTCAGTAC
CACACCTATC GCTACAACTA A
 
Protein sequence
MTDNAPQLAL RDVAARQLAN ATKTVPQLRT ITPRWLVRLL HWTPVEAGIY RVNQVKDASQ 
ITVACSERDE SELPETFVDY IDNPREYLLS AVNTVVDVHT RISDLYSNPH DQIREQLRLT
IEIMKERQES ELINSREYGL LNNVAPGQLV HTRNGAPTPD DLDELLIRVW KEPAFFLAHP
QAIAAFGREC TRRGVPPATV SLFGSSFITW RGVPLIPSDK VPLENGKTKI LLLRVGESRQ
GVVGLYQPNL PGEQGMGLSV RFMGINRKAL ASYLVSLYCS LAVLTDDALA VLDNVDVTQY
HTYRYN