| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_B2661 |
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| Symbol | |
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| ID | 3772742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007595 |
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| Strand | - |
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| Start bp | 3160 |
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| End bp | 5040 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637798362 |
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| Product | cysteine desulfurase |
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| Protein accession | YP_398710 |
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| Protein GI | 81230380 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.0591977 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.463261 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAATA CTGTTCCGTC CGTTCCGGCA GTGCCGAATC TGCCGACTCA ATCGGATCCC
TTTTTCAATG AGCGATCGCT TGAACAACTG ACTCAAACAG TGTTGCAAGA TCTGCAGCAG
GCTGGGGTTA GCGAAGCAGA ATCGGCTCCA ACGCCTCTAT CCGTTCCGAC CCCAGCACTC
CCAACCACAT CAGCTTTAGC AGTCCCTCAA TCTCCTACTG CGATCGCGAA TGTCCCTGCT
CCTCCGAGTT CTATCGATGA GCGATCGCTG GCTCAGTTGG CGCAAGCCGT TTTGCAAGAT
CCGCAGTTGG CCAGTGCGAT CGCATCTATA TTCCCTTCAG TAACCCTTCC AACGTCAGCC
TCAGTTCCTC GTTCAGTACC GGTGCCGCCG AGCTTTTTGC CGAGCCTCGT ACCCACAGCG
CCACCGATTC ACGATGAAGT GGGCGTGATT CCGCATCATC AATTGCCAGT TCCCAGCCAG
CCCACACCCG CAGGCTTGCA GCAGACTGCC TCAAGTAAGA GTGGCAGTGG TTTTTATTTC
ATTGATGAAC AGGTCGAAAC CGCGATCGCG GCACTGCACA GCAATCTGAC CGTATTTCCA
CAACTGACAA CGTCTTCAAT CCCAACTTTG ACCGGAGCTC ATTCAGCTGG AGCAGTTGGA
TTTGATATTC ATCAAGTCCG GCGGGATTTT CCGATTTTGC AGGAGCGCGT CAATGGCCGT
CCCCTAGTTT GGTTTGACAA TGCGGCGACG ACCCAGAAAC CTCAAGTCGT GATCGATCGC
CTGTCGCACT ATTACCAACA CGAGAACTCC AATATTCACC GTGCGGCCCA TGAGCTGGCA
GCGCGATCGA CGGATGCCTA TGAAGCGGCT CGTGAGCAAG TGCGGCATTT CCTTAATGCG
GCCTCCACTG AGGAAGTCGT GTTTGTGCGG GGCACCACCG AGGCGATCAA TCTGGTTGCT
AAAAGCTGGG GATCGCAGAA CCTCAAAGAA GGCGATGAAA TCGTCATTAC TTGGCTAGAG
CACCATGCCA ACATCGTGCC TTGGCAACAG CTCAGTGCTG AGACAGGGGC CCGGCTGCGG
GTCGTCCCTG TGGATGATTA TGGTCAAGTC CGCCTGGATG AATATCAAAA GTTGCTGAGC
GATCGCACCA AGATCGTCTC ATTCACGCAG GTCTCCAATG CCCTCGGCAC AATTACGCCA
GCCAAGGAAA TCATTGAACT GGCCCATCGT TACGGAGCGA AAGTGCTACT CGATGGCGCT
CAGTCGGTCT CTCACTTGGC GGTCGATGTG CAAGCGCTGG ACTGCGACTG GTTCGTTTTC
TCGGGCCACA AGGTCTTTGG CCCCACCGGA ATTGGCGTGC TCTATGGCAA ACAGGAGCTG
CTTGATGCGA CGCTACCTTG GCAAAGTGGT GGCAACATGA TCGCCGATGT CACGTTTGAG
AAAACGGTCT ATCAGCCGGC TCCGGCACGC TTTGAAGCTG GGACGGGCAA CATTGCTGAT
GCTGTGGGTT TGGGAGCAGC GCTGGAGTAT GTCCAAAAGA TTGGGCTAGA GGCGATCGCT
GCCTACGAGC ATGAGTTATT GGTTCATGGC ACTGCGCTGC TTAGTCAGAT TCCGGGATTA
CGGCTGATCG GTACGGCTCC GCACAAGGCA GCAGTGCTGT CTTTTGTTCT CGAGGGCTTT
AGTCCAGAGG CGATCGGTCA GGCATTGAAT CGAGAAGGGA TTGCAGTGCG GGCGGGGCAT
CACTGCGCTC AGCCAATTCT GCGACGCTTC GGGCTGGAAA CAACGGTGCG GCCATCGCTG
GCTTTTTACA ACACCTTCGA GGAGTTGGAG ACACTGGCAG CGGCGATTCG CCGGATTCAA
ACGGGGAGCC TCGCCCTCTA A
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| Protein sequence | MTNTVPSVPA VPNLPTQSDP FFNERSLEQL TQTVLQDLQQ AGVSEAESAP TPLSVPTPAL
PTTSALAVPQ SPTAIANVPA PPSSIDERSL AQLAQAVLQD PQLASAIASI FPSVTLPTSA
SVPRSVPVPP SFLPSLVPTA PPIHDEVGVI PHHQLPVPSQ PTPAGLQQTA SSKSGSGFYF
IDEQVETAIA ALHSNLTVFP QLTTSSIPTL TGAHSAGAVG FDIHQVRRDF PILQERVNGR
PLVWFDNAAT TQKPQVVIDR LSHYYQHENS NIHRAAHELA ARSTDAYEAA REQVRHFLNA
ASTEEVVFVR GTTEAINLVA KSWGSQNLKE GDEIVITWLE HHANIVPWQQ LSAETGARLR
VVPVDDYGQV RLDEYQKLLS DRTKIVSFTQ VSNALGTITP AKEIIELAHR YGAKVLLDGA
QSVSHLAVDV QALDCDWFVF SGHKVFGPTG IGVLYGKQEL LDATLPWQSG GNMIADVTFE
KTVYQPAPAR FEAGTGNIAD AVGLGAALEY VQKIGLEAIA AYEHELLVHG TALLSQIPGL
RLIGTAPHKA AVLSFVLEGF SPEAIGQALN REGIAVRAGH HCAQPILRRF GLETTVRPSL
AFYNTFEELE TLAAAIRRIQ TGSLAL
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