Gene Synpcc7942_B2659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_B2659 
Symbol 
ID3772740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007595 
Strand
Start bp2340 
End bp2723 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content52% 
IMG OID637798360 
Productnucleic acid binding protein 
Protein accessionYP_398708 
Protein GI81230378 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value0.234415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.629356 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCGG TCTTTGATAC CAACATCCTC ATCTACCACC TCAAAGGCTG TCTTCCTGAA 
GCGGGGAGTC AAATTCTGCG CAGCAGTCTG GGGCGCGGTG CCGTCTGTTC AGTCATTACC
CGCCTAGAGG TTTTGGGTTA CGACCAACCT TGGCCAGAAA GACTGAAAGC ACAAGCTTTG
CTCCAGCTAT TTCGAGAACG GGCATTGGAT GAATCGATTG CTGATTGCAC GATTCAGCTG
CGTCAACAAC AACGGATCAA ACTGCCCGAT GCCATCGTTG CCGCAACTGC GCTGACAGAG
AACTTGCCAC TCGTGACGCG CAACACCAAA GACTTTAAAG CCATCGCTGG CTTACAACTG
ATTAACCCCT TTCAACCGAA CTAG
 
Protein sequence
MQAVFDTNIL IYHLKGCLPE AGSQILRSSL GRGAVCSVIT RLEVLGYDQP WPERLKAQAL 
LQLFRERALD ESIADCTIQL RQQQRIKLPD AIVAATALTE NLPLVTRNTK DFKAIAGLQL
INPFQPN