Gene Synpcc7942_B2650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_B2650 
Symbol 
ID3772731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007595 
Strand
Start bp43298 
End bp43888 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content56% 
IMG OID637798402 
Producthypothetical protein 
Protein accessionYP_398750 
Protein GI81230369 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.970518 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGTT TAGCGCATCA GCGGCATTTT GCTGCAACTG TTCAGCCCCA AGCCGCTCCA 
AAACTCCCGC CCGTCAGCGC CCTCCTCTTC AAAATCATCC GCTTCTGGCT GACCAAACGC
GGCGGCATTC GGCACCAAGG CCAAAAGTAC ATTTGGAAAC CTGCCCGAGA GCTCCAAGCC
GAACTCGCCC AGTACTTCGA CGTCCGCGTC AGCCTCAGCA CCGTCGAACG CCACCTCCGC
AAGCTCGTTG CCATGGGGCT CCTCATCCGC GAGCAACTGC GCAAACACGA ATACCGACGC
TACTACTTCT ATCGGCTCGG CGATCGGGTC AAAACCTGCT TAGGCATGGC CTCCCCCCCA
GACGAAACGA GCCCTGCAGC CAGTGAGACT CGAAACGTCA CTCCTGACGG ATCACACAGA
AATCCTTTAC AGAAAAAACG CCATACAAGA GCAGTTGGCT TCGGAAAACA GCCCAAAAAC
CAAGAGAAGG ATTTGATCGA GTACGTTGGC ATGCCCGATC GCCCTAAAAA AGCCATCCAG
ATAGGTCGCT ATCTGGTCCT TGACGATGGG ATGTTTCCCC TCAGCCTCTA G
 
Protein sequence
MASLAHQRHF AATVQPQAAP KLPPVSALLF KIIRFWLTKR GGIRHQGQKY IWKPARELQA 
ELAQYFDVRV SLSTVERHLR KLVAMGLLIR EQLRKHEYRR YYFYRLGDRV KTCLGMASPP
DETSPAASET RNVTPDGSHR NPLQKKRHTR AVGFGKQPKN QEKDLIEYVG MPDRPKKAIQ
IGRYLVLDDG MFPLSL