Gene Synpcc7942_B2645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_B2645 
Symbol 
ID3772726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007595 
Strand
Start bp39571 
End bp40194 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content55% 
IMG OID637798398 
Producthypothetical protein 
Protein accessionYP_398746 
Protein GI81230364 
COG category[S] Function unknown 
COG ID[COG3544] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTC TCATCCGCCT TCTACCTAGC AGCCTGAGCC TACTCCTTGG TCTATCCCTG 
CCCGCGATCG CGATGCCCGG CATGGAACAT AACCATAATC ACGACCACAG CAGTCATGGC
AACCATGCGA TGCACGATGT CGGTCCCGCA GATGCCACCT ACGACCTGCG CTTCATTGAT
GCCATGATTC AGCACCACTA CGGCGCGATC GAAATGGCGA AGGTCACGAT CAATCAGGGT
TATCCAGGGG CTGGTGCCTT GGCTAGTCAA ATCATCTCAG CCCAGTCTTG GGAAATTGCC
AACATGCTGC GCCAACGGCA ACTGCGTTTC CCTGATGCTC CAATCATGCC GGTTCGCTAC
ACCCCCGGCC AGTCCACTGT TTTGAGTCAG CTTCAACCGA TGACTGAAGC CGACAAAGTG
GCAATGCGGA TGAGCGGCAC GATGGACATG ACGGGCGATC GCGGCAAAGC TTTTGCCGCC
GCGATGATTC CGCACCATGA GATGGCGATC GCCATGGCAG AAGATGCGCT AGCAAAATCT
GGTGATTCTT TTGTGCGATC GATTTCTTGG GAGATTATTC GTACCCAAAG CGACGAGATT
CGCCGCCTAC GAGGACTGCT CTAA
 
Protein sequence
MKLLIRLLPS SLSLLLGLSL PAIAMPGMEH NHNHDHSSHG NHAMHDVGPA DATYDLRFID 
AMIQHHYGAI EMAKVTINQG YPGAGALASQ IISAQSWEIA NMLRQRQLRF PDAPIMPVRY
TPGQSTVLSQ LQPMTEADKV AMRMSGTMDM TGDRGKAFAA AMIPHHEMAI AMAEDALAKS
GDSFVRSISW EIIRTQSDEI RRLRGLL