Gene Synpcc7942_B2644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_B2644 
Symbol 
ID3772725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007595 
Strand
Start bp38521 
End bp39228 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content43% 
IMG OID637798397 
Productresponse regulator receiver domain-containing protein 
Protein accessionYP_398745 
Protein GI81230363 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCACT CACTCCATCC CTTGTTTCAA GCGATCGCAA CTGCCCCAAC AGAGCAGACT 
TTGCGATTAA CAGTGATGGA TAACATCAGT GAATATTTTG GAGTGCAGCG CTGGGGAATT
TATCTTCTAG ATACAAACAA TAATTTGGCT AGCGTAGAGG CAAAAGGGGT ATCAGATACC
TTCATTGAGC AGTATCAACG ATTTGGAAAA GCTGTTGATC CAGTCTTAAA GTATGTTCTT
GAAAACCATG CTCCAGCTCA CGAAGAGTTA GTCTTGCCAG AAGGAACTTG GAAGCAGAGT
GAACTCTATC AGCGATGCTG TTCGACTCAT GACCATGAAC ATATTATGAC AGGGCCATTG
GTGGGTCAGG GTCAGTTGAT TGGCACCATC AATTTTGCTC GTATTGGTCA TATTCCAGCA
TTTAATCACT TAGAGCTTGC AAGTTTAGGC GCAGTTTGTA CTCACTTCTC TGCACGCCTT
GCGGAACTGC GAAAGCCACA CTCAGTCTCT GGGCAAATCA GCAATCGACT GACATCCAGA
GAAATTCAGA TTGCTAATCT TGTTGCAAAA GGACTCACGA ATGCAGAAAT TGGAGCAGAG
CTATGGATTA CTCATAACTC TGTCAAACAA GCTTTAAAGC GGATATTTCG AAAACTAGAA
GTTTCTGCCC GAACTGAGAT GGTAGCTAAA TTAAGAGATA TTATCTAA
 
Protein sequence
MPHSLHPLFQ AIATAPTEQT LRLTVMDNIS EYFGVQRWGI YLLDTNNNLA SVEAKGVSDT 
FIEQYQRFGK AVDPVLKYVL ENHAPAHEEL VLPEGTWKQS ELYQRCCSTH DHEHIMTGPL
VGQGQLIGTI NFARIGHIPA FNHLELASLG AVCTHFSARL AELRKPHSVS GQISNRLTSR
EIQIANLVAK GLTNAEIGAE LWITHNSVKQ ALKRIFRKLE VSARTEMVAK LRDII