Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_B2644 |
Symbol | |
ID | 3772725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007595 |
Strand | + |
Start bp | 38521 |
End bp | 39228 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637798397 |
Product | response regulator receiver domain-containing protein |
Protein accession | YP_398745 |
Protein GI | 81230363 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTCACT CACTCCATCC CTTGTTTCAA GCGATCGCAA CTGCCCCAAC AGAGCAGACT TTGCGATTAA CAGTGATGGA TAACATCAGT GAATATTTTG GAGTGCAGCG CTGGGGAATT TATCTTCTAG ATACAAACAA TAATTTGGCT AGCGTAGAGG CAAAAGGGGT ATCAGATACC TTCATTGAGC AGTATCAACG ATTTGGAAAA GCTGTTGATC CAGTCTTAAA GTATGTTCTT GAAAACCATG CTCCAGCTCA CGAAGAGTTA GTCTTGCCAG AAGGAACTTG GAAGCAGAGT GAACTCTATC AGCGATGCTG TTCGACTCAT GACCATGAAC ATATTATGAC AGGGCCATTG GTGGGTCAGG GTCAGTTGAT TGGCACCATC AATTTTGCTC GTATTGGTCA TATTCCAGCA TTTAATCACT TAGAGCTTGC AAGTTTAGGC GCAGTTTGTA CTCACTTCTC TGCACGCCTT GCGGAACTGC GAAAGCCACA CTCAGTCTCT GGGCAAATCA GCAATCGACT GACATCCAGA GAAATTCAGA TTGCTAATCT TGTTGCAAAA GGACTCACGA ATGCAGAAAT TGGAGCAGAG CTATGGATTA CTCATAACTC TGTCAAACAA GCTTTAAAGC GGATATTTCG AAAACTAGAA GTTTCTGCCC GAACTGAGAT GGTAGCTAAA TTAAGAGATA TTATCTAA
|
Protein sequence | MPHSLHPLFQ AIATAPTEQT LRLTVMDNIS EYFGVQRWGI YLLDTNNNLA SVEAKGVSDT FIEQYQRFGK AVDPVLKYVL ENHAPAHEEL VLPEGTWKQS ELYQRCCSTH DHEHIMTGPL VGQGQLIGTI NFARIGHIPA FNHLELASLG AVCTHFSARL AELRKPHSVS GQISNRLTSR EIQIANLVAK GLTNAEIGAE LWITHNSVKQ ALKRIFRKLE VSARTEMVAK LRDII
|
| |