Gene Synpcc7942_B2634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_B2634 
Symbol 
ID3772754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007595 
Strand
Start bp29941 
End bp31320 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content54% 
IMG OID637798387 
Producthypothetical protein 
Protein accessionYP_398735 
Protein GI81230353 
COG category[S] Function unknown 
COG ID[COG5361] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.805074 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCA TCAGTATCGT CACCGCACCG TTGCCAGTGC AGGCTCAGAC AGTGCTGACT 
GACCAAACAA TTCGAGCGAT CGGCGTTGAT GCTTATCTGT ATTTCTACCC GCTTGTAACC
CTAGACATTA CTCGCCGACA GCTCACCAAT GCTCCAGCTG GGGCGAGTGA TTTCGCTGGA
CCGCCGAACA CATTTGTGAA CGTGAAGACC TATCCGCCTG CCGACTTCAA AGGCGTGGTA
CGGCCGAACT TTGACACGCT ATATTCTTCC GCTTGGCTCG ATCTGACAAG GGAGCCAATG
ATCATCTCTG TTCCAAATAC CAACGGCCGG TATTACCTTC TGCCGATGCT TGACATGTGG
TCCGACGTGT TTGCCTCACC GGGCTGGCGC ACGACCGGTA CGCAAGCCCA AGACTTCCTC
CTTTCACCAC CAGGTTGGTC TAGTGCTGTC CCTGCCAAAG TCACCCGAAT CGATGCACCA
ACCCCATTTG TCTGGATTAT TGGTCGGACA CAGACAAATG GGCCTGCTGA CTACGATGCA
GTCAATAAGA TCCAAGCTGG TTACAAGGTT ACCCCGTTGT CGCAGTGGGG CAAAACGGTA
GTTCCTCCTG CATTCGTTCG GGACACCACG ATTGATATGA AGACGCCACC GAAGGTGCAG
GTCGATGGCA TGGATGCCGC TACCTTCTTT GCTTACGCTG CAGAACTGCT GAAGGTGAAC
CCGCCGCATG TGACCGACCA GCCGATCATC GCGCAGCTCA AGCGCCTTGG TTTCGAGCCA
GGCAAGAGCT TTAACTTAAA GTCCGCTACA CCTGAGGTAC AGAAGGCATT GGCAACCGTG
CCGCAAGATG CACAGAAGTT GATGGTGTCG AAGACGCCTA CGCTCGCTAG CATCGTCAAC
GGCTGGTCGA TGAACACCAC AACGATGGGG GTCTACGGTA CCTACTACCT GAAACGCGCA
ATCATTGCTC AGGTTGGGCT GGGGGCAAAC CTGCCGGAGG ACGCAATCTA TCCGCTCAAT
GTTGCGGACA GCACCGGGAA ACCACTGGAT GGGGCGAACA CTTACAAGTT GCACTTCAAT
AAACAAGACC TGCCACCGGT TGGCGCATTC TGGTCGGTCA CTTTGTATGA CCCAGAAGGA
TTCCAGGTGG CAAATTCGCT GAACCGGTTT GCTGTCAGCA GCTGGATGCC GTTTGTCTAC
AACTCAGATG GTTCACTCGA TCTTTATATC CAGAATTCAA GTCCTGGGAA GGATAGGGAG
GCAAATTGGC TGCCTGCTCC GAAGGGACCC TTCAATCTCA CAATGCGCCT CTACGCACCG
GCAGCGAGTG CAATCAATGG TGAGTGGAAC CCACCTCCTG TAACCCGGAT GAGTAACTAA
 
Protein sequence
MNSISIVTAP LPVQAQTVLT DQTIRAIGVD AYLYFYPLVT LDITRRQLTN APAGASDFAG 
PPNTFVNVKT YPPADFKGVV RPNFDTLYSS AWLDLTREPM IISVPNTNGR YYLLPMLDMW
SDVFASPGWR TTGTQAQDFL LSPPGWSSAV PAKVTRIDAP TPFVWIIGRT QTNGPADYDA
VNKIQAGYKV TPLSQWGKTV VPPAFVRDTT IDMKTPPKVQ VDGMDAATFF AYAAELLKVN
PPHVTDQPII AQLKRLGFEP GKSFNLKSAT PEVQKALATV PQDAQKLMVS KTPTLASIVN
GWSMNTTTMG VYGTYYLKRA IIAQVGLGAN LPEDAIYPLN VADSTGKPLD GANTYKLHFN
KQDLPPVGAF WSVTLYDPEG FQVANSLNRF AVSSWMPFVY NSDGSLDLYI QNSSPGKDRE
ANWLPAPKGP FNLTMRLYAP AASAINGEWN PPPVTRMSN