Gene Synpcc7942_B2629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_B2629 
Symbol 
ID3772749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007595 
Strand
Start bp19583 
End bp20806 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content56% 
IMG OID637798378 
Productsulfonate ABC transporter, periplasmic sulfonate-binding protein, putative 
Protein accessionYP_398726 
Protein GI81230348 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.272886 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCATC CTCCTTTCTG CCAGTGCTGC GGCCTGTCTC GTCGCCAATT CCTCAAGCTC 
TCAGGCTTAT TCACCGGATC TTTAGCGCTC GCTGCGGGTT GCCGTCCCAG CGATAACACC
GCAACCGCGC CTAGTAGCCC TGCTAATAAT CAACCGCTCA AAATTGGCTA CCTGCCGATT
ACCGATGCCG CACCATTGTT GATTGGTCAT TCTCAAAAGT TCTTTGAACA GGAAGGCTTG
CAGGTTGAGG CTCCAACCCT ATTCCGGTCT TGGCCCCAGA TTATTGAGGC GTTTATTGCC
CGGAAGGTGA ACGCCATTCA CCTGTTGATG CCTGCTACCA TTTCGCTGCG CTACGGCCGC
AATTTCCCTG CCAAGGTGGT CGCTTGGAAC CATACCAACG GCTCAGCACT GACGGTAGGA
CCGAGCGTCA ACAAAGTTGA GGACTTGGCC GGTCGCACGA TCGCGGTGCC CTTTTGGTAT
TCCGTTCACA ACGTCGTGCT GCAACAAGTT CTGCAAGACA CCGGCTTGAA AGTGGTACGC
CGTCCCCGCG AAGCAGCGAT CGCAGACGAT GAAGTCAACC TTGTGGTGCT GCCACCGCCA
GATATGATTT CGGCTCTGGC CAACGACAGC ATTGGCGGCT ACATCGTGGC AGATCCCTTT
AATGCCGCTG CTGAAAAACG CAAGGTCGGC AAGATTCTCC GCTTTACCGG CGATGTCTGG
AAAGATCACG CCTGCTGTGT GATTTTCATG CACGAAGACG ACCTGAAAGA GCGGCCAGAG
TGGGCACAGC GCGTCGTCAA TGGACTCGTG GCTTCCCAAG CTTGGATGCG CGATCGCCGT
CCAGAAGTTG CCGAAATTCT CTCTAAAGAT GGAGCCGGCA AATATACGCC CCACCCACTA
CCCATCCTGC AGCAAGCCCT GACCGCCTAT AGCCCCGAAG TCTATGGCCC GATTGGTGCA
ATTCGCCACG CTGATTGGGG CAGCGATCGC ATTGACTTTC AGCCCTATCC CTTCCCGTCC
TACACCGAGA AATTGGTGAC GCTACTCCAG CAAACCCAAG TCGAAGGTGA GCGAACCTTC
CTCGATCAAC TCTCGCCTCA GCAGGTCGCC ACTGATTTAG TGGATGACTC TTTTGTGCGC
AAAGCGATCG CGGCGAAGGG TGGCCCCGCT CAATTTGGCC TCACTCCTGA CTTCCGTCGT
CAAGAAGTCT TCCAGGTCGC CTGA
 
Protein sequence
MIHPPFCQCC GLSRRQFLKL SGLFTGSLAL AAGCRPSDNT ATAPSSPANN QPLKIGYLPI 
TDAAPLLIGH SQKFFEQEGL QVEAPTLFRS WPQIIEAFIA RKVNAIHLLM PATISLRYGR
NFPAKVVAWN HTNGSALTVG PSVNKVEDLA GRTIAVPFWY SVHNVVLQQV LQDTGLKVVR
RPREAAIADD EVNLVVLPPP DMISALANDS IGGYIVADPF NAAAEKRKVG KILRFTGDVW
KDHACCVIFM HEDDLKERPE WAQRVVNGLV ASQAWMRDRR PEVAEILSKD GAGKYTPHPL
PILQQALTAY SPEVYGPIGA IRHADWGSDR IDFQPYPFPS YTEKLVTLLQ QTQVEGERTF
LDQLSPQQVA TDLVDDSFVR KAIAAKGGPA QFGLTPDFRR QEVFQVA