Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_B2621 |
Symbol | |
ID | 3772769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007595 |
Strand | + |
Start bp | 12400 |
End bp | 12948 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637798371 |
Product | hypothetical protein |
Protein accession | YP_398719 |
Protein GI | 81230340 |
COG category | [S] Function unknown |
COG ID | [COG1285] Uncharacterized membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.613191 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGTCA TCTTTCTTCC TCAAGGCGAC TGGCTAGGTC TCTCCTTCCG TCTCCTCCTA GCGATGCTGG TGGGTGCAGT GATCGGACTC AATCGGCAGC GAGGGGGACG ACCAGCAGGG ATGCGCACCT TCACTCTCGT TGCCATGGGC TCTGCCCTAT TTGTGATGGT GCCTATTCAG GCAGAGGGTG ACAGTAGCTT TGCAGCAATC AATGCTCTTA GCCGCACTGT ACAGGGAGTT GCCGCTGGCG TGGGCTTTCT GGGAGCGGGA CTCATTCTGC AACGAGCGCC CAAAACCAAG CGATCGGGGC GTCCTCGCGT TAGCGGCCTC ACCACCGCCG CCACCATTTG GATTACAGCC GCTTTGGGTG CTGTGATTGG CTGTGGTCTT TGGCAACTTG GCCTAATCGG TACCTTTTTT ACCTTGCTGA CCCTGAGCGG CTTCAAACGC TTGCAACGGA TCGCTTGGTT ACGACAGAGC TGGGAACGAT TGATCGCTTG GGAAGCTAAG ACTTTACCCC CCGACGCAGA AGAGGAGGAC GACGATTAA
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Protein sequence | MNVIFLPQGD WLGLSFRLLL AMLVGAVIGL NRQRGGRPAG MRTFTLVAMG SALFVMVPIQ AEGDSSFAAI NALSRTVQGV AAGVGFLGAG LILQRAPKTK RSGRPRVSGL TTAATIWITA ALGAVIGCGL WQLGLIGTFF TLLTLSGFKR LQRIAWLRQS WERLIAWEAK TLPPDAEEED DD
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