Gene Synpcc7942_B2621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_B2621 
Symbol 
ID3772769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007595 
Strand
Start bp12400 
End bp12948 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content56% 
IMG OID637798371 
Producthypothetical protein 
Protein accessionYP_398719 
Protein GI81230340 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.613191 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTCA TCTTTCTTCC TCAAGGCGAC TGGCTAGGTC TCTCCTTCCG TCTCCTCCTA 
GCGATGCTGG TGGGTGCAGT GATCGGACTC AATCGGCAGC GAGGGGGACG ACCAGCAGGG
ATGCGCACCT TCACTCTCGT TGCCATGGGC TCTGCCCTAT TTGTGATGGT GCCTATTCAG
GCAGAGGGTG ACAGTAGCTT TGCAGCAATC AATGCTCTTA GCCGCACTGT ACAGGGAGTT
GCCGCTGGCG TGGGCTTTCT GGGAGCGGGA CTCATTCTGC AACGAGCGCC CAAAACCAAG
CGATCGGGGC GTCCTCGCGT TAGCGGCCTC ACCACCGCCG CCACCATTTG GATTACAGCC
GCTTTGGGTG CTGTGATTGG CTGTGGTCTT TGGCAACTTG GCCTAATCGG TACCTTTTTT
ACCTTGCTGA CCCTGAGCGG CTTCAAACGC TTGCAACGGA TCGCTTGGTT ACGACAGAGC
TGGGAACGAT TGATCGCTTG GGAAGCTAAG ACTTTACCCC CCGACGCAGA AGAGGAGGAC
GACGATTAA
 
Protein sequence
MNVIFLPQGD WLGLSFRLLL AMLVGAVIGL NRQRGGRPAG MRTFTLVAMG SALFVMVPIQ 
AEGDSSFAAI NALSRTVQGV AAGVGFLGAG LILQRAPKTK RSGRPRVSGL TTAATIWITA
ALGAVIGCGL WQLGLIGTFF TLLTLSGFKR LQRIAWLRQS WERLIAWEAK TLPPDAEEED
DD