Gene Synpcc7942_B2620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_B2620 
Symbol 
ID3772768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007595 
Strand
Start bp11202 
End bp12299 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content49% 
IMG OID637798370 
Productputative catalase 
Protein accessionYP_398718 
Protein GI81230339 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0753] Catalase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.717058 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTCG TTATCTACTA CATGACTGTT CTCTGCAAAG CATTTGACTG TTTTAATTCC 
TCCGCTGTTG AAAACACCAT GATCCGTATT CGAAATCGTT GGTTTCGTTG GTTAGCGATC
GCCCTTGCAA GCCTTGTTGC CAGCATTGGG ATTGCGACGG TTGGCTTTGC CGCAACTGGT
GTCACTCCTG ATCAAGTTCT GAGTGCAATT GAAGGGACCT TTGGTGTCAA TGTAGGTCAG
CGCCGCAATC ACATCAAAGG GACTTGTGCG GTCGGCAATT TTGTAGCGAC CACTGAAGCC
AAGACCTACT CACGATCGCC CCTCTTCTCA GGTCAATCTA TTCCTGTTGT GGCTCGTTTC
TCCCTTGCAG GAGGTAATCC GAAGGCTCCT GACACAGCCA AAAATCCACG GGGACTTGGT
CTTCAGTTCC AGTTGCCAAA TAATCGCTTC TTGAACATGG CACTGCTCAA TACTCCTGTT
TTTGGAGTTG CCAGTCCAGA AGGGTTTTAT GAAAACATCT TGGCAATTCG ACCGGACCCG
ACAACAGGAA AACCTGATCC CGAAAAGGTG AAGGCATTCC GTGAAAAATA TCCAGAGAAT
AAAGCTCAGG CTGCCTTCCT AGCTAGTAAT AACCCCCCGA CCAGTTATGC CAACACAAGC
TACTTTGGAT TACACGCCTT TAAATTCATT AATCAAACTA ATCAAACCCG TCTCGTCCGT
TGGCAGTTTG TTCCCCAAGA TGGCGAAAAA CGTCTGACTG ATGCAGAACT TCAAGCTGCA
CCTGCCAACT TCTTGGAGCA GAAACTAATT GAAAGAACCC AAGATAGCCC AGTGAAATGG
GACTTTTGGA TCACGCTGGG GCAGCCCGGT GATGCCGAGG ATAACCCAAC GATCGCTTGG
CCGAGCGATC GCCAGCAAGT GAAAGTTGGA ACTTTGACCT TGACGGCTGC TTCTCCGCAG
CCAGGAGCTG CCTGCGAAGG GATTAACTAT GATCCGCTGG TCTTAAGTGA TGGAATTGAG
CCGACCAACG ATCCAGTCTT ACAGTTCCGC TCAGGTGTTT ATGCACTCTC CTATAGCAAG
CGAACTCGTG GCCTCTAA
 
Protein sequence
MTVVIYYMTV LCKAFDCFNS SAVENTMIRI RNRWFRWLAI ALASLVASIG IATVGFAATG 
VTPDQVLSAI EGTFGVNVGQ RRNHIKGTCA VGNFVATTEA KTYSRSPLFS GQSIPVVARF
SLAGGNPKAP DTAKNPRGLG LQFQLPNNRF LNMALLNTPV FGVASPEGFY ENILAIRPDP
TTGKPDPEKV KAFREKYPEN KAQAAFLASN NPPTSYANTS YFGLHAFKFI NQTNQTRLVR
WQFVPQDGEK RLTDAELQAA PANFLEQKLI ERTQDSPVKW DFWITLGQPG DAEDNPTIAW
PSDRQQVKVG TLTLTAASPQ PGAACEGINY DPLVLSDGIE PTNDPVLQFR SGVYALSYSK
RTRGL