Gene PMT9312_1808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1808 
Symbol 
ID3766636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand+ 
Start bp1707966 
End bp1709069 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content32% 
IMG OID637798355 
Productthreonine synthase 
Protein accessionYP_398306 
Protein GI78780194 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.71327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGTTAT TAAATAAAAT TAAGAATAAA TTACGGATCA ATTACAGAAA AAAAAGATGG 
CCTGGTCTAA TTGATGCTTA TAAACAATAT CTTCCAGTTA CAAAAAAAAC TCCAATTATC 
TCACTAAACG AAGGAAATAC TCCACTAATT TTTAGTGACT CAATTAGCAA ATTGATTGGA 
AATGGAACTA AGGTTTTTTT AAAATATGAT GGTTTAAACC CTACAGGATC TTTTAAAGAT 
CGGGGAATGA CTATGGCCAT TAGCAAAGCA AAAGAAGAAG GGCGTGAAGC TGTAATTTGT 
GCAAGCACTG GAAACACTTC TGCTGCTGCT GCTGCATATG CTTCTAGAGG AGGATTAAAA 
CCTTATGTTT TAATCCCAGA AGGATTTGTT GCACAAGGAA AGCTTGCACA AGCTTTAATG 
TATGGTGCTG AGATAATATC TATTAATGGG AACTTTGATA AAGCTCTAGA AATTGTAAGA 
GATTTATCTG CTGAACATCC AATAGAACTT GTTAATTCTG TTAATCCCTA TCGAATACAA 
GGTCAAAAGA CTGCAGCCTT TGAAATTGTT GATGACTTAG GTATTGCACC TGATTGGCTT 
TGTATTCCAA TGGGTAATGC AGGAAATATA ACTGCTTATT GGATGGGGTT TAAAGAATAT 
TCAAAAATAA AAAGAAATTT AAAATTACCA ATTATGATGG GTTTTCAATC CGAAGGCTCT 
GCACCACTAG TGCAAAATAT AATAATTAAA GAACCCGAGA CAATTGCAAC AGCAATAAGA 
ATTGGCAATC CTGTTAATAG AGAAAAAGCA AAAAAAGTAA AAAAAGAAAG TAAAGGAGAC 
TTTCAATCAG TTACGGATGA AGAAATAATC AATGCTTATA AAATACTTGC TAAAGAGGGA 
GTGTTTTGTG AACCTGCCAG TGCAGCATCA GTTGCTGGAT TAATTAAAAA TAAAAATAGA 
ATTCAAAAAG AATCAACTAT TGTTTGTGTT CTTACTGGAA ATGGCTTGAA AGACCCTGAT 
TGCGCTATTA ATAACAATGA TGCTATTTTC AGGAAAAATA TTGAACCTTC GTTAAAAAAT 
ATAACTAAAA TTTTAGGATA TTAA
 
Protein sequence
MVLLNKIKNK LRINYRKKRW PGLIDAYKQY LPVTKKTPII SLNEGNTPLI FSDSISKLIG 
NGTKVFLKYD GLNPTGSFKD RGMTMAISKA KEEGREAVIC ASTGNTSAAA AAYASRGGLK 
PYVLIPEGFV AQGKLAQALM YGAEIISING NFDKALEIVR DLSAEHPIEL VNSVNPYRIQ 
GQKTAAFEIV DDLGIAPDWL CIPMGNAGNI TAYWMGFKEY SKIKRNLKLP IMMGFQSEGS 
APLVQNIIIK EPETIATAIR IGNPVNREKA KKVKKESKGD FQSVTDEEII NAYKILAKEG 
VFCEPASAAS VAGLIKNKNR IQKESTIVCV LTGNGLKDPD CAINNNDAIF RKNIEPSLKN 
ITKILGY