| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1798 |
|---|
| Symbol | aroE |
|---|
| ID | 3766625 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | + |
|---|
| Start bp | 1694751 |
|---|
| End bp | 1695611 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 637798344 |
|---|
| Product | shikimate 5-dehydrogenase |
|---|
| Protein accession | YP_398295 |
|---|
| Protein GI | 78780183 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0169] Shikimate 5-dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCAA GTAAGACCTC TTTTATTGCA TTAATCGGCA ATCCAGTAAG CCATTCTTTG
TCGCCAATCA TGCAAAATGC TGCCCTTCAG TATTTAGGCT TAGATTTAAT TTATATTGCT
ATGCCTTGTA AAGATGAAGA TCTAGAACTA GTTATGAATT CTTTGAAAAA AATTAATTGC
AAAGGTTTAA ATATTACAAT TCCCCATAAA GAAAAAGTAT TTGACCTTTG TAGTGAAATT
TCTCCTATTG CTAATAAACT GAAAGCAATT AATACCTTAA AATTAAACTC TGCAAAAGAA
TGGAGCGCAA CTAATACAGA TGTTGAGGGA TTTATTTATC CATTAAAAAC ATTAAATTTA
ACAAAGAAAC AATCGATCGT TCTTGGCTCG GGTGGTGCAG CAAGATCTGT TATTCAAGGA
TTAATAAATT TAAATTTTTC TACAATTTCA GTAGTATCAC GTAACAAGTC ATCACTAGAT
GAATTAATAA AAAATTTTGA AAATCAAATT ACAATTGAGG GTTTGTTAAA TAATGATAAT
AGGACTGAAA CTTTAATTGA AGAGGCAGAT TTAATTGTAA ATACAACACC TGTAGGAATG
AAAACAACTA AACATGAGAT GAATGTATTG CCATATGGGG ACGTATTTTG GAGATCTCTT
AACTCGAAAA CAATTGTTTA CGATTTAATC TACAATCCTG CTCCAACTCC TCTATTGAAA
TTTAGTGCCA AAAAAGGATG CATAACTATC GATGGTCTCA AAATGCTTGT TGCTCAAGGA
GCGAAATCAT TATCATTTTG GACAAATGGT TTAGAAGTAC CTTTTCATAT TATGAATGAC
GCATTAAAAA ATTATCTTTA A
|
|---|
| Protein sequence | MISSKTSFIA LIGNPVSHSL SPIMQNAALQ YLGLDLIYIA MPCKDEDLEL VMNSLKKINC
KGLNITIPHK EKVFDLCSEI SPIANKLKAI NTLKLNSAKE WSATNTDVEG FIYPLKTLNL
TKKQSIVLGS GGAARSVIQG LINLNFSTIS VVSRNKSSLD ELIKNFENQI TIEGLLNNDN
RTETLIEEAD LIVNTTPVGM KTTKHEMNVL PYGDVFWRSL NSKTIVYDLI YNPAPTPLLK
FSAKKGCITI DGLKMLVAQG AKSLSFWTNG LEVPFHIMND ALKNYL
|
|---|
| |