Gene PMT9312_1794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1794 
Symbol 
ID3766621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1689375 
End bp1690733 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content34% 
IMG OID637798340 
Productputative chloride channel 
Protein accessionYP_398291 
Protein GI78780179 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAACT TTATAAAAGA TAATATTCAA AAAACAAGTA ATAATTCTTC TCGTAGCATT 
AAAAAATTAT TAAGACAAAG ATCTCTAGTC GTTGTATTTT CACTCTTATT AACAGGTTTA
GGGGCCTCAA TTACAAGCAT ATCTTTTAAA ACTGGAATCT ATTTTATTAA TAATTGGAGA
TTAGCATTAT TAGACCAATT CCCATCTATT GCGGTCTTAC CTATTTTTGG AGCTCTAGGA
GGAGCTATTG CAGGATATTT GATCAAAAAT ATTGCACCTG CTGCAAAAGG TTCAGGTGTG
AGTCAAATCA TGGGTTTCTT AAGACATAAA AAAGTTCCAA TGAATTTAAA AGTAGGATTA
GTAAAGCTCA TATCAGGAAT TATTGCTATT GGCAGTGGAT TCCCTTTAGG CCCAGAAGGT
CCATCAGTTC AAATGGGAGG ATCAGTAGCT TGGCAAATGG CCAAGTGGCT CAAAGCTCCT
ACAGCTTTCA GAAGAGTAAT CGTAGCAGCA GGTGGTGGTG CTGGAATAGC TGCAGTATTT
AGCGCTCCAT TAGGAGGGTT TGTCTATGCA ATAGAAGAGT TATTAAACTC TGCTAGACCA
GTAATTTTGC TATTAGTAGT AATTACAACT TTTATTGCAG ATTCATCTGC TGATATTATT
CAAGCCTTGG GTTTAGATCC TAAAGCAGGA GGCTTTGATT TTAACCTCGG ATTTTTGATT
CAAAAAGAAT ATGACCCATC AGTTTTTTTC TTACCTGTAG ATTTTATTTA CTTAGTTTTA
CTGGGAATAA TTATTGGGAT ATTTGCAGAA TTGTACAGCA GATATGTTTT GTTAATGCAA
AATCTTGGAA AAAAGTGGTA TAAAAATAAA TTTGTTTTAA AAATGAGTAT CTGTGGACTT
ATTTTAGGAA GTATCTACTC TTGTTTACCC AGTACATTTC ATAATTTAGA TGAATTACAG
AAAATAATAG CTGAACAAAA TATAAGTATT GGAATTGCTT TATTAGCAGT TTTAGTACTA
TTTATCACGA CTGGTTTGGC TGCAGCATCT GGAGCTCCTG GAGGATTATT CTATCCAATG
CTTACTTTAG GAGGAGCAAT CGGACTAATA ATGGGAAGCT GGGTAGAAAT TGCGACAGGA
CATGCTCCAA GTACGTACAT TTTTGCGGGA ATGGGAGCTT TCGTAGCTGG CTGTTCACGA
ACACCAATAA CAGCAATGTT TTTAGCTTTT GCTTTAACAA AAAATTTATT AATAATGAAA
CCTGTCTTAA TCAGCTGCAT TGCCAGTTTC TTGATAGCAA GAGCTTTTAA TGAAGAATCA
ATTTATGAAA GACAAATACA AATAGAATTA GAAGACTAA
 
Protein sequence
MPNFIKDNIQ KTSNNSSRSI KKLLRQRSLV VVFSLLLTGL GASITSISFK TGIYFINNWR 
LALLDQFPSI AVLPIFGALG GAIAGYLIKN IAPAAKGSGV SQIMGFLRHK KVPMNLKVGL
VKLISGIIAI GSGFPLGPEG PSVQMGGSVA WQMAKWLKAP TAFRRVIVAA GGGAGIAAVF
SAPLGGFVYA IEELLNSARP VILLLVVITT FIADSSADII QALGLDPKAG GFDFNLGFLI
QKEYDPSVFF LPVDFIYLVL LGIIIGIFAE LYSRYVLLMQ NLGKKWYKNK FVLKMSICGL
ILGSIYSCLP STFHNLDELQ KIIAEQNISI GIALLAVLVL FITTGLAAAS GAPGGLFYPM
LTLGGAIGLI MGSWVEIATG HAPSTYIFAG MGAFVAGCSR TPITAMFLAF ALTKNLLIMK
PVLISCIASF LIARAFNEES IYERQIQIEL ED