Gene PMT9312_1792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1792 
Symbol 
ID3766619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1685627 
End bp1686694 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content33% 
IMG OID637798338 
Productphospho-2-dehydro-3-deoxyheptonate aldolase 
Protein accessionYP_398289 
Protein GI78780177 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
TIGRFAM ID[TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACAT CATCAAATAA TTCTGCTTTA GAAAAGACAT CAGATTTACA TGTTGTTGAA 
ACACGTCCAT TAATACCTCC AAGCAGATTA CATAATGATA TACCTTTAGA TCACGCCTCT
GCTAATACAG TATCTAAAAC AAGAAGATCG ATACAAAATA TTTTGCATCA TAATGATCAG
AAGCTTTTAG TCATTGTGGG TCCATGTTCA ATTCATGATT TAGAGGCGGC AAAAGAATAT
TCAAAATATA TTGAAAACTT TCGAGAAATT TATAAAGATA AATTAGAAAT AATCATGAGA
GTATATTTTG AGAAACCAAG AACAACTATT GGTTGGAAGG GATTGATAAA TGATCCTCAT
CTAGATAATT CTTATGATAT TAATACTGGA TTAAGAAGGG CAAGAAGTTT ACTTTCATAT
TTAGCAACTC GTGGAATTCC TTCTGCTACA GAATTACTAG ATCCAATTGT TCCTCAATAT
ATTGCCGATT TAATAAGTTG GACAGCCATA GGCGCGCGGA CTACTGAAAG TCAGACTCAT
CGGGAAATGG CATCAGGATT ATCAATGCCT ATAGGTTTTA AAAATGGTAC AGATGGTTCT
TTTACTACTG CAATAAATGC AATGCAGTCA GCTTCAAAAT CTCATCATTT TTTAGGTGTA
AATCAAAATG GAATGGCTTC TATTGTTAAT ACAACAGGGA ATCCAGATGG ACATATAGTT
TTAAGAGGCG GTTCAAAAGG CCCAAATTTT GAAAGTGAAC ATGTTAAAAG AATTTCCTCT
GAATTGAAGC AATCTCATCT TCCCCATAAA GTGATGATTG ATTGTAGTCA TGGGAATTCC
AATAAAGATT TCCGAAAACA GTCGGAAGTG CTAAAAAATA TAGCTTCTCA AATTAGCAAT
GGTGAAAAAA ATATTTTAGG AGTTATGCTT GAAAGTCATT TGAAGGAGGG AAATCAAAAA
CTTTTAAAAA AAGAGGATCT TCAGTTTGGC AGAAGCATTA CAGATGCATG CATAGATATA
GAAACAACAA AAGAATTACT CGCTATTTTG TACAATTCAC TTAGTTAG
 
Protein sequence
MTTSSNNSAL EKTSDLHVVE TRPLIPPSRL HNDIPLDHAS ANTVSKTRRS IQNILHHNDQ 
KLLVIVGPCS IHDLEAAKEY SKYIENFREI YKDKLEIIMR VYFEKPRTTI GWKGLINDPH
LDNSYDINTG LRRARSLLSY LATRGIPSAT ELLDPIVPQY IADLISWTAI GARTTESQTH
REMASGLSMP IGFKNGTDGS FTTAINAMQS ASKSHHFLGV NQNGMASIVN TTGNPDGHIV
LRGGSKGPNF ESEHVKRISS ELKQSHLPHK VMIDCSHGNS NKDFRKQSEV LKNIASQISN
GEKNILGVML ESHLKEGNQK LLKKEDLQFG RSITDACIDI ETTKELLAIL YNSLS