| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1780 |
|---|
| Symbol | gcvT |
|---|
| ID | 3766607 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | + |
|---|
| Start bp | 1671418 |
|---|
| End bp | 1672530 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 637798326 |
|---|
| Product | glycine cleavage system aminomethyltransferase T |
|---|
| Protein accession | YP_398277 |
|---|
| Protein GI | 78780165 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
|---|
| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.655467 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTGC TTAAAAGTCC TTTATATGCA AAATATGTTC AATCCAATGC AAAATTAGTG
GATTTTGCAG GTTGGGAAAT GCCCATATCA TTTTCAGGAT TAATCAAAGA GCATGAATCA
GTTAGGTCTT CAGTAGGATT GTTTGATATT TCTCACATGG GTGTAATCTC TATTAAGGGA
ATCAATCCAA AGGATTATAT TCAAAAATTT TTTCCTACTA ATTTATACTC CTTTTCTGAA
GGTCAGGGGC TTTATACAGT AATGCTCAAT GAAAAAGGAG GAATAATAGA TGACTTAATA
ATTTATGACC TTGGTATACA AGACAATGAC ATATCAGAAG TATTGTTAAT AGTTAACGCA
AGTAGATATG AAGTAGATTT TCAATGGATA AAAAACAATT CAAATAAATA TGAAATTTCG
ATAACAAACT TTAAAAAAGA CAAAGTACTT TTAGCACTAC AGGGGAAAAA CTCATTCGAT
TTATTTGAAC AATGGATTGA ATCATCGATC TCACATATCC CTAACTTTGG ATGCGAATAT
AAAATTTTCG AACATATTTC TCCTAAAGAA AAAATCTTCG TTTCCAAGAC AGGATATACA
GGGGAAAATG GTCTAGAAAT ACTTTTATCT AAAAAAGCAG CAATTAATTT ATGGGATTTC
TCAATTTCCA AAAATGTTGC GCCTTGTGGT TTAGGAGCTA GAGATACTCT TAGACTTGAA
GCAGGCATGC ATCTTTATGG CCAAGACATT AATGAAGAAA CTTCTCCATA TGAAGCAGGG
TTAGGCTGGC TAGTACATCT AGAAAATAAT CACGAATTCT TTGGAAGAAG ATTTCTTGAA
GAGCAGTCAA GATTAGGTAT TCAAAAAAAG TTAGTTGGTC TCTTTATAGA AGGTAAAGCA
ATAGGAAGAA AAGGTTGCAT AGTACTTAAA GGTGAAGAAA ATATTGGAAC TATCACTAGC
GGCAGTTGGT CTCCAACTAA ACAACAAGCT ATAGCTTTTG CATACATCAA TACTTCGCAT
GCCTTAATAA ATAATGAAGT TCAAATACTA ATAAGAGGCA AAAAATTCAA AGGTTGCATA
ACAAAAAGAT CGTTTTATAA AAAGAATTAT TAA
|
|---|
| Protein sequence | MDLLKSPLYA KYVQSNAKLV DFAGWEMPIS FSGLIKEHES VRSSVGLFDI SHMGVISIKG
INPKDYIQKF FPTNLYSFSE GQGLYTVMLN EKGGIIDDLI IYDLGIQDND ISEVLLIVNA
SRYEVDFQWI KNNSNKYEIS ITNFKKDKVL LALQGKNSFD LFEQWIESSI SHIPNFGCEY
KIFEHISPKE KIFVSKTGYT GENGLEILLS KKAAINLWDF SISKNVAPCG LGARDTLRLE
AGMHLYGQDI NEETSPYEAG LGWLVHLENN HEFFGRRFLE EQSRLGIQKK LVGLFIEGKA
IGRKGCIVLK GEENIGTITS GSWSPTKQQA IAFAYINTSH ALINNEVQIL IRGKKFKGCI
TKRSFYKKNY
|
|---|
| |