Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1758 |
Symbol | |
ID | 3766584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 1649122 |
End bp | 1650255 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637798303 |
Product | SqdX |
Protein accession | YP_398255 |
Protein GI | 78780143 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAATTG CACTGTTTAC TGAAACTTTT TTACCTAAAG TTGACGGCAT AGTCACAAGA CTGACTAAAA CGATTGAATT TTTAATAAAA AATGGTGATG AAGTTATTAT TTTTTGTCCA GAGGGGTGTC CAGAATCATA TATGGGAGCA ACTGTAGTTG GAGTTGCTGC AATGCCCTTA CCACTATACC CAGAGTTGAA GCTTGGTTTA CCAGGTCCTG CAGTTTCAGA TAAGTTAGAA AAATTCAACC CAGATTTGAT TCATGTTGTT AATCCAGCTG TACTTGGCTT AGGTGGCATA TGGTTGGCGA AAACTAATAA TATTCCTTTA ATTGCTAGCT ATCATACTCA TCTTCCAAAA TATCTGGAAT ATTACGGTAT GGGTATGTTA GAGCCACTTT TGTGGGAATT ACTTAAAGCA GCTCATAATC AAGCCTTATT AAATTTATGT ACTTCCACCG CTATGGTCAA TGAGTTAAAA GATAAAGGTA TTCAAAGGAC TGCTCTATGG CAAAGAGGAG TAGATACTTA CAGTTTCCGA CCAGATTTGA GAAGTGAGGC AATGAGAGGA AAATTATTTG GGAAATATCA AGATGCTAAT TTCCTATTGA TTTATGTAGG AAGATTATCC GCAGAAAAAC AAATTGAGAG AATAAAACCA GTCTTAGAAA GTATTCCTAA TGCATGCCTA GCACTTGTAG GTGACGGACC ATATAGAAAC CAGCTTGAAA AAATATTCGA GAATACCAAG ACTAATTTCA TAGGATATTT ATCTGGAGAT GAACTTGCTA GCGCCTATGC CTCTGGTGAT ATATTTTTAT TTCCCTCTAG TACAGAAACA CTTGGATTGG TTTTACTAGA AGCAATGGCA GCAGGATGTC CAGTTATAGG AGCAAATAAA GGAGGAATTC CAGACATAAT TAGCGATGGT ATTAATGGTT GTTTATATGA TCCTGATGAA AAAGACAATG GTGAACAAAG TTTAATTGAA GCAACAAAAA AAATTCTAGA GAATGAAGAT AAAAGAGAAG TTATGAGGAA AGAGGCACGA AACGAAGCAG AAAAATGGGA TTGGAATCAA GCAACGTTAC AACTGCAAAA TTATTATTCA GATACTCTCA AAGAAATAGA TTAA
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Protein sequence | MKIALFTETF LPKVDGIVTR LTKTIEFLIK NGDEVIIFCP EGCPESYMGA TVVGVAAMPL PLYPELKLGL PGPAVSDKLE KFNPDLIHVV NPAVLGLGGI WLAKTNNIPL IASYHTHLPK YLEYYGMGML EPLLWELLKA AHNQALLNLC TSTAMVNELK DKGIQRTALW QRGVDTYSFR PDLRSEAMRG KLFGKYQDAN FLLIYVGRLS AEKQIERIKP VLESIPNACL ALVGDGPYRN QLEKIFENTK TNFIGYLSGD ELASAYASGD IFLFPSSTET LGLVLLEAMA AGCPVIGANK GGIPDIISDG INGCLYDPDE KDNGEQSLIE ATKKILENED KREVMRKEAR NEAEKWDWNQ ATLQLQNYYS DTLKEID
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