Gene PMT9312_1755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1755 
Symbol 
ID3766581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1646376 
End bp1646933 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content27% 
IMG OID637798300 
ProductTPR repeat-containing protein 
Protein accessionYP_398252 
Protein GI78780140 
COG category[S] Function unknown 
COG ID[COG1729] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATAT CTTCCTTTCA ATCCTATATA ATAATTCTTT TTGTAGTACT AATAATAATT 
TCTATTTTTG TTTTAAGACA ATTTTTAAGA ACAAGAAGTG AAGAATTGAA TTTAGTAAAA
TTTGAACAAA AAGGTTTAGA TTCCATAACT CAAGCCACAG AATTATATGA ATTTGGCTCT
ATTCAGATAA AAAAAAGATT ATATTCTGAA GCAACTAAGA CTTTTTTAAA AGCTATTGAT
AATTATGAAA ATGAACCTGA TGAGGCCAAA GCCATTATAA ATAATGCTTT AGGATTTTCT
TATGCTGCCC AAAATGAGTT TAAAAAAGCA ATTAAACACT ATAACTCAGC AATAAAATCA
CTCCCCGAAT ATCCAATAGC CTTAAATAAT CTTGCATCAG CACAACAGCG TTTATTGGAA
TATGACTTGG CATATGCCAC TTATCAGAAG GTTTTAGTTA TAGATCCAAA AAACAAAACC
GCAATTAAAA AAAGTAAGGA ATTAGAAAAA AGAAATAACT ACAAACCTTA TCAAGGGATA
AAAGATAAAG GATTTTAA
 
Protein sequence
MEISSFQSYI IILFVVLIII SIFVLRQFLR TRSEELNLVK FEQKGLDSIT QATELYEFGS 
IQIKKRLYSE ATKTFLKAID NYENEPDEAK AIINNALGFS YAAQNEFKKA IKHYNSAIKS
LPEYPIALNN LASAQQRLLE YDLAYATYQK VLVIDPKNKT AIKKSKELEK RNNYKPYQGI
KDKGF