Gene PMT9312_1750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1750 
Symbol 
ID3766576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1641066 
End bp1642805 
Gene Length1740 bp 
Protein Length579 aa 
Translation table11 
GC content29% 
IMG OID637798295 
ProductDNA polymerase III, tau subunit 
Protein accessionYP_398247 
Protein GI78780135 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit
[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00401811 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTAATA TACATAAGCC TTTTCATCAA AAATATAGAC CAAGCAACCT AGATGAACTG 
GTAGGTCAAA ATTTTATATC CATTACTCTA AAACAAGCAC TATTAACAAA AAAGATTTCT
CCAGCTTATC TTTTTAATGG TCCAAGAGGC ACTGGCAAAA CATCAAGTGC GCGAATATTT
GCGAAATCTT TAAACTGCCA AGCATTCGAA GAACCAACAA TACATCCTTG TGGTAAGTGT
GACTTATGTA GACAAATCAC AGATGGGAAC GCTCTAGATA TTATCGAAAT TGATGCAGCA
TCGAATACTG GAGTAGAAAA TATAAGAGAA ATTATTGAAA GAGCTAGATT TGCACCTACT
CAAGCGAGAT GGAAGGTATA CGTTATTGAT GAATGTCATA TGCTTTCAAC AGCAGCTTCA
AATGCTTTAT TAAAAACTAT TGAAGAACCA CCCTCAAGAG TAGTATTTAT TCTTGCGACA
ACAAATCCTG AGAGAGTATT AAATACAATA CAAAGTAGAT GTCAAAAGTT TGATTTTAGA
AGAATAAGTC CTAGTGACAT TTTTCAACAT TTATCAGAAA TCGCAGAAAA AGAATCGATT
AAATATGAAG TTCAGGCGTT AAACATTATT GCAAAAAGAT CTAATGGAGG TATGAGAGAT
GCACAAAGCC TCCTTGAACA ACTTAATCTT CTTCCGGAAG GCATAACAAT TAATAATATT
AAAAATCTGT TGGGAGAAGT ATCAGAAATT GAATTAACAA ATCTGATCAA ATCATTAATT
GAGAATAATC CAGAATCATT AATTATCACC TGCAACAAAT TATATGATGA TGGAAACGAA
CCCTATCAAA TCATTATTGG GTTATTAAAC ATAACAAGAG ATTTACTACT TCACACTACA
AATAATAAAT ATTCAGATCT TTATTATACT TCTGATGGAT TTCAAGATGA ATTGGATAAA
ATCTCAAAAA CAATCAATAA ATCAACAATA ATTAATTGGC ATAATCATCT TAGAAATATT
GAATATCAAC TCAAAACAAG TGATAATCCA AGGCTTTGGC TGGAAATACA TTTAACTGGC
CTTTTAGATA ATCACAAGAT AAATAGTATT GATAATAAGC AAGAAAAGAT AAAAAGAAAG
GTAATAATTA ATGAAGAAAA TAATTCTAAT GAAATTCAAA AACCAAGTAT CAAAGAGAAT
ATCAGTAGAG AGCAATTGAT TTCAAAAAAA GTAGAAAAAG TAGAAAAAGT AGAAAATTTT
AATGGTCTTG AAAAAGAAAA TATGGGAAAT ATTTCTAAAA ATAGCCAAAA TAATCTTGGT
TCAAATAACT TAAAAGATAA ATGGGAATTA ATTCTTTCTA AATTAGAGTT GCCATCAACA
AGAATGTTAC TTTCACAACA AGCAGAACTT GAAAGTTTTG ATTCGGAGAA AATCACAATT
GCATTAGCTC CAAACTGGGA AAATATGATA AAAAGCAGAA AAGTTATAAT TGAAAATACA
GTTAAAAAGA TCTTTGGAGA TCAAATAATA CTTAATTTTT CAACCAAACA ATTAATTCAA
AGTAACAAAA CAAACACTCC AGAAGTCTCC CAAAATGAAG TAAAGAATTT GAAACTAACA
AAAAAAAATG AACTAAAAAC TAATTCTTCA ACAAAAATAT CTAACGAGGA AACTTATGAT
GATAGTTCAA AAAACTTAGC AAATTTTTTT AATGGAGAAA TTATAGACCT TGATGAATAA
 
Protein sequence
MPNIHKPFHQ KYRPSNLDEL VGQNFISITL KQALLTKKIS PAYLFNGPRG TGKTSSARIF 
AKSLNCQAFE EPTIHPCGKC DLCRQITDGN ALDIIEIDAA SNTGVENIRE IIERARFAPT
QARWKVYVID ECHMLSTAAS NALLKTIEEP PSRVVFILAT TNPERVLNTI QSRCQKFDFR
RISPSDIFQH LSEIAEKESI KYEVQALNII AKRSNGGMRD AQSLLEQLNL LPEGITINNI
KNLLGEVSEI ELTNLIKSLI ENNPESLIIT CNKLYDDGNE PYQIIIGLLN ITRDLLLHTT
NNKYSDLYYT SDGFQDELDK ISKTINKSTI INWHNHLRNI EYQLKTSDNP RLWLEIHLTG
LLDNHKINSI DNKQEKIKRK VIINEENNSN EIQKPSIKEN ISREQLISKK VEKVEKVENF
NGLEKENMGN ISKNSQNNLG SNNLKDKWEL ILSKLELPST RMLLSQQAEL ESFDSEKITI
ALAPNWENMI KSRKVIIENT VKKIFGDQII LNFSTKQLIQ SNKTNTPEVS QNEVKNLKLT
KKNELKTNSS TKISNEETYD DSSKNLANFF NGEIIDLDE