Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1750 |
Symbol | |
ID | 3766576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 1641066 |
End bp | 1642805 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 637798295 |
Product | DNA polymerase III, tau subunit |
Protein accession | YP_398247 |
Protein GI | 78780135 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit [TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00401811 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTAATA TACATAAGCC TTTTCATCAA AAATATAGAC CAAGCAACCT AGATGAACTG GTAGGTCAAA ATTTTATATC CATTACTCTA AAACAAGCAC TATTAACAAA AAAGATTTCT CCAGCTTATC TTTTTAATGG TCCAAGAGGC ACTGGCAAAA CATCAAGTGC GCGAATATTT GCGAAATCTT TAAACTGCCA AGCATTCGAA GAACCAACAA TACATCCTTG TGGTAAGTGT GACTTATGTA GACAAATCAC AGATGGGAAC GCTCTAGATA TTATCGAAAT TGATGCAGCA TCGAATACTG GAGTAGAAAA TATAAGAGAA ATTATTGAAA GAGCTAGATT TGCACCTACT CAAGCGAGAT GGAAGGTATA CGTTATTGAT GAATGTCATA TGCTTTCAAC AGCAGCTTCA AATGCTTTAT TAAAAACTAT TGAAGAACCA CCCTCAAGAG TAGTATTTAT TCTTGCGACA ACAAATCCTG AGAGAGTATT AAATACAATA CAAAGTAGAT GTCAAAAGTT TGATTTTAGA AGAATAAGTC CTAGTGACAT TTTTCAACAT TTATCAGAAA TCGCAGAAAA AGAATCGATT AAATATGAAG TTCAGGCGTT AAACATTATT GCAAAAAGAT CTAATGGAGG TATGAGAGAT GCACAAAGCC TCCTTGAACA ACTTAATCTT CTTCCGGAAG GCATAACAAT TAATAATATT AAAAATCTGT TGGGAGAAGT ATCAGAAATT GAATTAACAA ATCTGATCAA ATCATTAATT GAGAATAATC CAGAATCATT AATTATCACC TGCAACAAAT TATATGATGA TGGAAACGAA CCCTATCAAA TCATTATTGG GTTATTAAAC ATAACAAGAG ATTTACTACT TCACACTACA AATAATAAAT ATTCAGATCT TTATTATACT TCTGATGGAT TTCAAGATGA ATTGGATAAA ATCTCAAAAA CAATCAATAA ATCAACAATA ATTAATTGGC ATAATCATCT TAGAAATATT GAATATCAAC TCAAAACAAG TGATAATCCA AGGCTTTGGC TGGAAATACA TTTAACTGGC CTTTTAGATA ATCACAAGAT AAATAGTATT GATAATAAGC AAGAAAAGAT AAAAAGAAAG GTAATAATTA ATGAAGAAAA TAATTCTAAT GAAATTCAAA AACCAAGTAT CAAAGAGAAT ATCAGTAGAG AGCAATTGAT TTCAAAAAAA GTAGAAAAAG TAGAAAAAGT AGAAAATTTT AATGGTCTTG AAAAAGAAAA TATGGGAAAT ATTTCTAAAA ATAGCCAAAA TAATCTTGGT TCAAATAACT TAAAAGATAA ATGGGAATTA ATTCTTTCTA AATTAGAGTT GCCATCAACA AGAATGTTAC TTTCACAACA AGCAGAACTT GAAAGTTTTG ATTCGGAGAA AATCACAATT GCATTAGCTC CAAACTGGGA AAATATGATA AAAAGCAGAA AAGTTATAAT TGAAAATACA GTTAAAAAGA TCTTTGGAGA TCAAATAATA CTTAATTTTT CAACCAAACA ATTAATTCAA AGTAACAAAA CAAACACTCC AGAAGTCTCC CAAAATGAAG TAAAGAATTT GAAACTAACA AAAAAAAATG AACTAAAAAC TAATTCTTCA ACAAAAATAT CTAACGAGGA AACTTATGAT GATAGTTCAA AAAACTTAGC AAATTTTTTT AATGGAGAAA TTATAGACCT TGATGAATAA
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Protein sequence | MPNIHKPFHQ KYRPSNLDEL VGQNFISITL KQALLTKKIS PAYLFNGPRG TGKTSSARIF AKSLNCQAFE EPTIHPCGKC DLCRQITDGN ALDIIEIDAA SNTGVENIRE IIERARFAPT QARWKVYVID ECHMLSTAAS NALLKTIEEP PSRVVFILAT TNPERVLNTI QSRCQKFDFR RISPSDIFQH LSEIAEKESI KYEVQALNII AKRSNGGMRD AQSLLEQLNL LPEGITINNI KNLLGEVSEI ELTNLIKSLI ENNPESLIIT CNKLYDDGNE PYQIIIGLLN ITRDLLLHTT NNKYSDLYYT SDGFQDELDK ISKTINKSTI INWHNHLRNI EYQLKTSDNP RLWLEIHLTG LLDNHKINSI DNKQEKIKRK VIINEENNSN EIQKPSIKEN ISREQLISKK VEKVEKVENF NGLEKENMGN ISKNSQNNLG SNNLKDKWEL ILSKLELPST RMLLSQQAEL ESFDSEKITI ALAPNWENMI KSRKVIIENT VKKIFGDQII LNFSTKQLIQ SNKTNTPEVS QNEVKNLKLT KKNELKTNSS TKISNEETYD DSSKNLANFF NGEIIDLDE
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