| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1737 |
|---|
| Symbol | |
|---|
| ID | 3766563 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | + |
|---|
| Start bp | 1623061 |
|---|
| End bp | 1625802 |
|---|
| Gene Length | 2742 bp |
|---|
| Protein Length | 913 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 637798282 |
|---|
| Product | DNA mismatch repair protein MutS |
|---|
| Protein accession | YP_398234 |
|---|
| Protein GI | 78780122 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
|---|
| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0169322 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAAG ATACGATAAT TCAAAAGAAT TTATTTGCTA TTGATAATGA AAATAATGAG
CAAAAAGAAA TAACAAAAAT TCCAGAAGAT TTATCTTGGG AAGATTTAAA AAAAGAATCG
CAAAAAAGAC CTAGACAAAG AAAAAATACA ACTAATTTAA TAAATAAATT CAAGACTGAT
TTGATTTCAA AAAATAAAAA TGTTTGTATC AATGAAGAAT CATATAGTTA CAAAACTGTT
TCAAAACTGA AATTAACTCC TGTAATGAAA CATTATGTAA CTCTAAAAGA GGAAAATAAA
GATAGGTTAT TGCTCTATAG ATTGGGAGAT TTTTTTGAAT GTTTTTTTGA GGACGCTGTA
TTAATATCTA ACCTTTTAGA AATAACACTA ACCAGTAAAG ATGCTGGCAA AGAAATTGGT
AAGATCCCCA TGGCAGGCGT TCCTTATCAT GCAATGGAGA GATACTGTGC TGATTTAATT
AAAAAAAATT ATTCTGTGGT TATATGTGAC CAATTAGAAA AAAGTTCTGG TAATTATGGG
ACTCCAATTA AAAGAGGAAT AACAAGAATC ATTACTCCTG GAACTGTAAT TGAAGAGGGC
ATGTTAATAG CAAAGAAAAA TAATTGGATT ACTGCTATTT ACTTATCAGA AGAAAATTCA
AATGAATCTT ATGAATGGGG TATATCAAAA GCTGATGTAA GCACAGGAGA ATTAATAACT
ATGGAAGGTC AATCTCTGTC AAAACTATTT GATGAAATTA TTAAATTAGA TTCTTCAGAA
ATCATTATAG GAAGCAATGA AGTAAGAAAT TTATTAATGA ATGGAAATAG TCAAATTTCA
TATACTGTTT CACAAGAGAC TAATTTCGGC ATTAATGAAG CAAATTATCT AATAAAAAAA
TATTTCCAAA TTGTAAGCCT AGAAGGAATA GGACTTAAAA ATTTAAACAA TGCGACTAGA
TCACTTGGAG GTTTATTAAA TTATTTAAAA AAAATTAATC CTTTAAATTT AGATAAGGAT
TCTTCTGTAA AAATCTCATT AGACTTTCCA CAAATTCAAT TTTGTCACAA CAAATTAATT
ATTGATTATC AAACTCAAAA AAATTTAGAA ATAAAAAATA CACAACGAGA AAACAATTAT
GTAGGTTCGC TACTATGGAG TATTGATAGA ACATATACCT GCATGGGTGC CAGGTGTTTA
AGAAGATGGA TAGATTCACC ACTATTAAAC GTTAATGAAA TTTATAAAAG ACAAAATATA
ATTTCAAACT TTATTGAATC GAAACAAGTC CGCATGGATA CCCAAAATTT ACTTAGAGCA
ATGGGTGATT TAGAAAGACT TGCAGGAAGA GCTTGCGCAG GTCATGCAAG TCCTAGAGAC
TTAATTGCAA TCGCGGAAGG TTTAAAAAAA TTGCCTAGAA TAAAATCCAT CATTGAATTA
TTTAAATATG ATCTCCCAGA TTGGACTGAT CAATTAAAAA ATATTGATGA AGAACTCTTA
GAATTAGCTG ATACGATTAG TTTTCAACTA ATAGAACATC CTCCTCTTAA TATAAGTGAA
GGAGGCATGA TCCACGATGG TGTTGACAAT ATATTAGACG GTTTACGCAA TTTAATGGAT
GATTACTCTG AGTGGCTAAA TCAAGAGGAA TTAAAAGAGA GGAAAATTAG CAAAATTTCA
AACCTAAAAA TTCAATTTCA TAAAAATTTT GGCTACTACA TATCTATAAA TAAATCAAAA
GTTAATTTAG CTCCACAACA TTGGATAAAA AGGCAAACAC TGACTAATGA AGAAAGGTAT
ATCACTACAG ATATTAAAAA TAAAGAAAAT AAGATTTTCC AAATCAAAAG TCGAGCTTCA
TCAAGGGAAT ATGAAATTTT TTGCGAATTA AGAAAAATGG TTGCTGAAAA AACAAAACAA
ATAAGATCAA TTGCTAAATC CATAGCATCT CTTGATGCAT TACTTGGATT GTCAATTACT
TCAGTAGAAA ACAATTTTAT AAAACCTGCG TTAATCCCAA TAAATGATTC ACAGAAAAAA
AATAGTACTA AAATTATTGC AGGAAGAAAT CCAATAGTTG AGCAATTATT AAATGATAAA
AAGTTTACAG CGAATGATAT TTGTTTTGAT GATAACCAGA AATTAATTAT TTTAACTGGT
CCCAATGCAA GCGGGAAAAG TTGCTTTATA AGACAAATTG GTTTAATACA AATCCTTGCA
CAAATTGGTA GCTTTATTCC GGCAAATAAA GCTGAAATCA AGATTGCAGA TAGGATTTTT
ACAAGAATTG GGGCGGTTGA TGATCAATCT TCAGGACAAT CAACATTTAT GGTAGAAATG
TCTGAAACTG CATCAATTTT AAATCAGGCA ACTTCGAGCT CACTTGTATT ACTTGATGAG
ATAGGTAGAG GGACATCTAC TTTTGATGGC CTTTCCATAG CTTGGTCTGT AAGTGAATAT
CTTGCAAAAA AAATTAAATG TAACACTATT TTTGCTACTC ACTATCATGA ATTGAATTAT
TTAAAAAATT CAAATAAAAA TATAGAAAAT TTTCAAGTTT TAGTAGAGCA AAATAACGAT
CAAATAATTT TTAGTCATAA GATTAAAAAA GGAGGTTCAA ACAAAAGTTA CGGAATAGAA
GCAGCTAAAT TAGCAGGAGT TCCAAGAGAA GTTATAGAAA AAGCTAAATT AGTTTTAAAT
TCTTTAGAAG AAAATAATAA ATTCAATAAA AATAATGATT AA
|
|---|
| Protein sequence | MKEDTIIQKN LFAIDNENNE QKEITKIPED LSWEDLKKES QKRPRQRKNT TNLINKFKTD
LISKNKNVCI NEESYSYKTV SKLKLTPVMK HYVTLKEENK DRLLLYRLGD FFECFFEDAV
LISNLLEITL TSKDAGKEIG KIPMAGVPYH AMERYCADLI KKNYSVVICD QLEKSSGNYG
TPIKRGITRI ITPGTVIEEG MLIAKKNNWI TAIYLSEENS NESYEWGISK ADVSTGELIT
MEGQSLSKLF DEIIKLDSSE IIIGSNEVRN LLMNGNSQIS YTVSQETNFG INEANYLIKK
YFQIVSLEGI GLKNLNNATR SLGGLLNYLK KINPLNLDKD SSVKISLDFP QIQFCHNKLI
IDYQTQKNLE IKNTQRENNY VGSLLWSIDR TYTCMGARCL RRWIDSPLLN VNEIYKRQNI
ISNFIESKQV RMDTQNLLRA MGDLERLAGR ACAGHASPRD LIAIAEGLKK LPRIKSIIEL
FKYDLPDWTD QLKNIDEELL ELADTISFQL IEHPPLNISE GGMIHDGVDN ILDGLRNLMD
DYSEWLNQEE LKERKISKIS NLKIQFHKNF GYYISINKSK VNLAPQHWIK RQTLTNEERY
ITTDIKNKEN KIFQIKSRAS SREYEIFCEL RKMVAEKTKQ IRSIAKSIAS LDALLGLSIT
SVENNFIKPA LIPINDSQKK NSTKIIAGRN PIVEQLLNDK KFTANDICFD DNQKLIILTG
PNASGKSCFI RQIGLIQILA QIGSFIPANK AEIKIADRIF TRIGAVDDQS SGQSTFMVEM
SETASILNQA TSSSLVLLDE IGRGTSTFDG LSIAWSVSEY LAKKIKCNTI FATHYHELNY
LKNSNKNIEN FQVLVEQNND QIIFSHKIKK GGSNKSYGIE AAKLAGVPRE VIEKAKLVLN
SLEENNKFNK NND
|
|---|
| |