| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1732 |
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| Symbol | secA |
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| ID | 3766557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | - |
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| Start bp | 1618103 |
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| End bp | 1620934 |
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| Gene Length | 2832 bp |
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| Protein Length | 943 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637798276 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_398229 |
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| Protein GI | 78780117 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.40392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAAAC TTTTGTTGGG AGATCCGAAT ACACGAAAGT TAAAGCGCTA TCAACCAATA
GTGGAAGAGA TAAATTTTTT AGAAGAAGAA ATTTCTAAAT TAACTGATGA TGAGTTGAGA
CAAGAAACTC ATAATCTCAA ATCACAGATC TCATCAGAAT CAGATATTAA ACAACAAAAA
GAACTCTTGG ATGAATCTCT TCCAAAAGCC TTTGCGATTG TTAGAGAAGC AAGTAAACGT
GTTCTGGATA TGCGACATTT TGATGTTCAG TTAATAGGCG GGATGGTTTT ACATGAATGT
CAAATCGCTG AGATGAAGAC TGGAGAAGGA AAAACTCTTG TAGCAACATT ACCTTGTTAT
TTAAATGCTT TAACTGGAAA AGGGGTTCAT GTAGTTACTG TAAATGATTA TTTAGCTAGA
AGAGATGCTG AGTGGATGGG CCAAGTTCAT CGTTTTTTAG GCTTATCCGT TGGTTTGATT
CAACAAGATA TGAGCCCTGT TCAGAGAAAG AAAAATTACG ACTGCGATAT AACTTATGCT
ACGAATTCTG AATTAGGATT TGATTATTTA AGAGATAATA TGTCCACCGA TATTAATGAG
GTAGTGCAAA GACCATTCAA TTACTGTGTG ATTGATGAGG TTGATTCAAT ATTAATTGAT
GAAGCAAGAA CACCTCTAAT CATTTCTGGC CAAGTTGAAA GACCCCAAGA AAAATATCAA
AAAGCTTCAG AATTAGCTCT GGCACTAGTT AAAGCAAAAG AAATAGGTAA AGATGGTATA
GATCCAGAAG GCGATTATGA AGTTGATGAA AAGCAGAGAA GTTGTATATT AACTGATCAG
GGTTTCGCTA AATGTGAAGA GTATTTGGCA GTTAGCGATT TATATAATCC CAAAGATCCT
TGGGCGCACT ACATAACCAA TGCTTTAAAA GCTAAAGAAT TATTTATTAA AGATGTAAAT
TATATTATTA AAAATAATGA GGCTGTAATA GTGGACGAAT TTACAGGAAG AGTAATGCCA
GGAAGGAGAT GGAGTGACGG ACAGCATCAG GCGATAGAAG CGAAAGAGAG TCTTAAAATT
CAGCCTGAGA CTCAAACATT AGCATCTATA ACTTATCAGA ATTTTTTCCT TTTATATCCT
GGTTTGGCAG GTATGACAGG AACAGCAAAA ACAGAAGAGG TTGAATTTGA AAAAACTTAT
AAATTAGAAT CAACCGTTAT ACCAACAAAT CAAATAAGAA AGAGAGAAGA TTTGCCTGAT
CAAGTATTTA AGACAGAGAT AGGTAAATGG AAAGCTGTTG CTAGAGAAAC TGCGCAAATT
CATAGAGCTG GTAGACCTGT TTTAGTTGGT ACAACAAGTG TTGAAAAAAG TGAGTTGTTA
AGTTCACTTT TAGCTGAAGA AAAAATCCCA CATAATTTGT TAAACGCTAA GCCAGAGAAC
GTTGAACGTG AGGCAGAAAT TGTAGCTCAG GCTGGAAGAG CAGGTGCTGT TACTATTGCT
ACTAATATGG CTGGAAGGGG AACAGATATA ATTCTCGGCG GTAACAGTGA TTATATGGCA
AGACTTAAAT TAAAAGAGAT TCTAATTCCT TTATTAGTAA AGCCAAATAA TGAGCATAAG
CCACCAATCC CTAAACAACG AAGTTCAAAA TCTAAGGGTG GTTTTTCTTC AAAAGTTGGC
TCAAATTTAA CAAAGAACAT TCCAGACTAT TCAACAAGTC TTTTTCCTTG CAAACTGGAT
GAAGAAATCC AAAAGAAACT CTCAGTTTTA TCTGATGAAC TTGTTAAGAA TTGGGGTGAT
AGACAACTTT CTGTCTTGGA TTTAGATGAC AGAATAGCTA CAGCTGCAGA AAAAGCACCA
ACCGAAGATA AAATGATAAA GCTTTTGAGA GAATCTTTAT CACGTGTAAA AGACGAATAT
GAAAAAGTGT TGACTCATGA AGAAAAAAAA GTAAGAGAAG TCGGAGGCTT ACATGTTATT
GGTACTGAGA GACATGAATC AAGAAGGGTG GATAATCAAC TTAGAGGTAG AGCAGGAAGA
CAAGGTGATT TTGGAAGTAC AAGATTCTTT TTATCTTTAG AAGATAATTT ATTAAGGATT
TTTGGGGGTG AAAGGGTAGC AAATCTAATG AATGCATTTA GGGTTGATGA AGATATGCCT
ATAGAATCAG GAATGCTTAC TAGGTCTTTA GAAAGTGCTC AAAAGAAAGT AGAAACATAT
TATTACGATA TTAGAAAACA AGTTTTTGAA TATGATGAGG TAATGAATAA TCAAAGAAAG
GCAGTTTATA GCGAAAGACT AAGAGTCTTG CAAGGCACTG ATTTAAAGAG ACAAGTTATA
GGATATGGAG AAAGAACAAT GTATGAAATT GTGGAGGCTT ATATTAATCC TGATCTACCT
CCAGAAGAAT GGGATATTGC TCAATTAATT TCTAAAGTCA AAGAATTTAT ATATTTATTA
GATGACCTTA AAGCTGATGA CGTCAAGTTA CTTTCAATAG AAGAATTAAA AAACTATCTT
CAAGAGCAAT TGCGAACAGC TTATGATTTG AAGGAATCAC AAATAGAACA GATTAGACCA
GGATTAATGA GAGAAGCTGA AAGATTCTTT ATTTTGCAGC AAATTGATAA TTTATGGAGA
GAACATCTTC AATCCATGGA TTCTTTAAGA GAATCGGTTG GATTGAGAGG TTATGGACAA
AAAGATCCTT TAATCGAGTA CAAAAATGAA GGATATGATA TGTTTCTCGA AATGATGACT
AATATGAGAC GCAATGTTAT TTATTCAATG TTTATGTTTC AACCTAAAAC TGATAAGGAT
GATAAAAATT AA
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| Protein sequence | MLKLLLGDPN TRKLKRYQPI VEEINFLEEE ISKLTDDELR QETHNLKSQI SSESDIKQQK
ELLDESLPKA FAIVREASKR VLDMRHFDVQ LIGGMVLHEC QIAEMKTGEG KTLVATLPCY
LNALTGKGVH VVTVNDYLAR RDAEWMGQVH RFLGLSVGLI QQDMSPVQRK KNYDCDITYA
TNSELGFDYL RDNMSTDINE VVQRPFNYCV IDEVDSILID EARTPLIISG QVERPQEKYQ
KASELALALV KAKEIGKDGI DPEGDYEVDE KQRSCILTDQ GFAKCEEYLA VSDLYNPKDP
WAHYITNALK AKELFIKDVN YIIKNNEAVI VDEFTGRVMP GRRWSDGQHQ AIEAKESLKI
QPETQTLASI TYQNFFLLYP GLAGMTGTAK TEEVEFEKTY KLESTVIPTN QIRKREDLPD
QVFKTEIGKW KAVARETAQI HRAGRPVLVG TTSVEKSELL SSLLAEEKIP HNLLNAKPEN
VEREAEIVAQ AGRAGAVTIA TNMAGRGTDI ILGGNSDYMA RLKLKEILIP LLVKPNNEHK
PPIPKQRSSK SKGGFSSKVG SNLTKNIPDY STSLFPCKLD EEIQKKLSVL SDELVKNWGD
RQLSVLDLDD RIATAAEKAP TEDKMIKLLR ESLSRVKDEY EKVLTHEEKK VREVGGLHVI
GTERHESRRV DNQLRGRAGR QGDFGSTRFF LSLEDNLLRI FGGERVANLM NAFRVDEDMP
IESGMLTRSL ESAQKKVETY YYDIRKQVFE YDEVMNNQRK AVYSERLRVL QGTDLKRQVI
GYGERTMYEI VEAYINPDLP PEEWDIAQLI SKVKEFIYLL DDLKADDVKL LSIEELKNYL
QEQLRTAYDL KESQIEQIRP GLMREAERFF ILQQIDNLWR EHLQSMDSLR ESVGLRGYGQ
KDPLIEYKNE GYDMFLEMMT NMRRNVIYSM FMFQPKTDKD DKN
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