Gene PMT9312_1717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1717 
Symbol 
ID3766542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1604561 
End bp1605220 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content27% 
IMG OID637798261 
ProductDedA family alkaline phosphatase-like protein 
Protein accessionYP_398214 
Protein GI78780102 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATTTAA TTTTTATAAA TTTTCTTACT TCAATCCCTG ACTATATTAG TTTGGCTGTT 
GAAAAGAATT CAACAATTGC ATACCTAACA ATTTGTTTGG CTATGTTTTT AGAAAACATA
ATACCTCCAA TCCCTTCAGA AATAATAATG CCGTTGGGAG GATTTTTTGT TTATCAACAA
AAATTAAATT TCTACATTTT AGTTTTTTGG GGGTTATTAG GAACGATTCT AGGATCATTG
CCTTGGTATT ACTTAGGTAG ATTAGTAAAT GAAAAAAGAC TTTCAATTTT TTTAGATAAA
AAAGGAAAAT ATTTAGGAAT TTCTTCTAAT GATTTAAATA AAAGTAAAAG GTGGTTTGAT
AAATACGGGG TTTCTTTAGT TTTTTGGGGC CGATTAGTAC CAGGTATAAG AACGTTAATT
TCAGTTCCTG CTGGTATAGA ACTTATGCCA TTAAGAAAAT TCTTGATTTG GACTACATTT
GGTAGCTTTA TATGGGTCGC ACTTCTCACT TATGCAGGAT ATTTATTTGG TGAAAATTAT
CCAATAATTG AAACTTATTT AGATCAAATC AAATATTTTG TAAAGCCAAT TTTAATTTTA
ATTTTCTTAT ATTTTTTTAT AAAACTACTT ATTAGATTTT TAAAAAACAA TAGAGCTTAG
 
Protein sequence
MNLIFINFLT SIPDYISLAV EKNSTIAYLT ICLAMFLENI IPPIPSEIIM PLGGFFVYQQ 
KLNFYILVFW GLLGTILGSL PWYYLGRLVN EKRLSIFLDK KGKYLGISSN DLNKSKRWFD
KYGVSLVFWG RLVPGIRTLI SVPAGIELMP LRKFLIWTTF GSFIWVALLT YAGYLFGENY
PIIETYLDQI KYFVKPILIL IFLYFFIKLL IRFLKNNRA