Gene PMT9312_1716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1716 
Symbol 
ID3766541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1604163 
End bp1604564 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content33% 
IMG OID637798260 
Productsingle-stranded DNA-binding protein 
Protein accessionYP_398213 
Protein GI78780101 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAGTA TTAAAAAAAA AATAATTATG GAAATTAACA CTATTAACCT AGTTGGCAGA 
GCTGGAAGAG AACCAGATGT CAGATATTTT GAATCTGGCA GTATCGTAGC GAATTTCACT
CTTGCAGTGA ATAGAAGAAG CAGAGATGAA GAACCAGATT GGTTTAATTT AGAAATATGG
GGCAAACAAG CTCAAATAGC AGCAGATTAC GTTAAAAAAG GATCTTTAAT TGGAATTACA
GGGAGCTTTA AAATTGATAG TTGGAAAGAT AAAAATACTG GTGAAGATAG ATACAAACCA
GTTGTTAGGG TAGATAGATT AAACTTACTA AGCTCCCGAA AAGAATCTGA AAATAACCAA
TATTCTAACA ACAGTAGTAA CTCCAGCGAA ATCCCTTTCT AA
 
Protein sequence
MSSIKKKIIM EINTINLVGR AGREPDVRYF ESGSIVANFT LAVNRRSRDE EPDWFNLEIW 
GKQAQIAADY VKKGSLIGIT GSFKIDSWKD KNTGEDRYKP VVRVDRLNLL SSRKESENNQ
YSNNSSNSSE IPF