| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1707 |
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| Symbol | |
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| ID | 3766532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | - |
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| Start bp | 1596532 |
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| End bp | 1597320 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 637798251 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_398204 |
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| Protein GI | 78780092 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAACTT TTAAAAAAGT TAAGGTTTGT TTTTTATTAA TTTTTGTTTT TGTCAATATT
TTTTATATTG CACCATGCTA TTCATTATCT TTAAGAGAGG ATTTGTTTAA AAATGCAATA
GATTTAAGTT CAGGCGGACA ATTTAATCTC GCTCTACAAG AATGGAATCA CTATCTCGAT
TCTTATCCTG ATGATGCTGC CGCTTTGAGC AATAGAGGAA ATGTAAGACT TGTCATTGGA
GATGTAGAGG GATCAATAGA TGATCAAAAT AAGGCAATAG GTTTAAATCC TAATGAAATA
GATCCTTACA TTAACAGAGG TATAGCAGAG GAGGCCTTGG GTCTATGGTC GCAAGCAAAA
AAAGATTATA TGTTTGTTAT TTCGCAAGAT AATAAGAATT TCTCTGCATT ATATAATTTG
GCTAATGTTG AAGGTTCTGC ATCACAATGG GAAAAAGCAA GAGATTTATT TTCAAAAGCT
GCTACATATA ATCCTGGATT TGCGATGGCA AGATCAAGTA TGGCTTTAGC AGATTTCCAG
TTGGGAAATA TTGATGAATC TGAAAAAGAA TTAAAAAAAT TAATTAGACG TTATCCAACT
TTTGCAGATG CTAGGGCAGC TTTAACAGCT TTGAATTGGT ATAATGGTGA ATATGGTAAA
GCAGAGAGTA ATTGGATAGC AGTAACTGAA TTAGATCCTA GGTATAGTGA TGAGAAATGG
TTAAAAACAA TAAGAAGATG GCCTCCAAAA CCAATTAAGG ATTTAATGAA CTTTATTGAT
TTAAAATAA
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| Protein sequence | MITFKKVKVC FLLIFVFVNI FYIAPCYSLS LREDLFKNAI DLSSGGQFNL ALQEWNHYLD
SYPDDAAALS NRGNVRLVIG DVEGSIDDQN KAIGLNPNEI DPYINRGIAE EALGLWSQAK
KDYMFVISQD NKNFSALYNL ANVEGSASQW EKARDLFSKA ATYNPGFAMA RSSMALADFQ
LGNIDESEKE LKKLIRRYPT FADARAALTA LNWYNGEYGK AESNWIAVTE LDPRYSDEKW
LKTIRRWPPK PIKDLMNFID LK
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