Gene PMT9312_1702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1702 
Symbol 
ID3766527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1590257 
End bp1591501 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content40% 
IMG OID637798246 
Product3-oxoacyl-[acyl-carrier-protein] synthase II 
Protein accessionYP_398199 
Protein GI78780087 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID[TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAATT TCCATCGAGT AGTTATTACC GGTATCGGAG CAGTAACTCC AATTGGTAAC 
AACATTGATG AATATTTACT AAGTCTTCAA AAAGGTGCTA ATGGTGTCTC AGGTATCACT
CTGTTTGATC CAGTAGATCA TCCTTGCAAA TTTGCAGCAG AAGTTAAAAA TCTTCAATCT
CAAAATTTCA TAGAAGCCAA AGAATCCAAA AGGTGGGATC GTTTCTCACA GTTTGGAGTT
ATTGCTGCAA AGCAAGCCTT TAATGATTCT GGTCTTGAAA TTAATGAAGC TAATGCATCA
AGAATTGGAG TGATTATTGG CTCAGGTGTT GGAGGCTTAC TAACTATGGA AAGTCAAGCT
CAAATACTGA GTCATAAAGG GCCAAAAAGA GTAAGTCCAT TTACAGTCCC AATGATGATT
CCAAATATGG CAACTGGACT AGCTGCCATT GCTTTGGGTG CAAAAGGCCC AAGTTCCTCT
GTTTCCACTG CTTGCGCTGC TGGCTCTAAT GCAATTGGTG ATTCTTTTAG ATTACTCCAA
CTTGGAAAAG CAGATGCAAT GATCTGTGGA GGTGCAGAAG CAAGTATTAC ACCTCTTGGA
GTAGCTGGCT TTGCCAGTGC CAAAGCTCTT TCATTCAGGA ATGAAAGTCC CCAGACAGCT
AGTAGACCTT TTGATGCTGA AAGAGACGGT TTTGTTATTG GAGAGGGTTC CGGCATTCTT
GTGTTAGAAA CTTTAGAGAA TGCTCAAAAA AGGGATGCAA GAATCTATGG AGAAATTATT
GGATATGGAA CAACATGCGA TGCTCATCAC ATCACTGCTC CCTCTCCAGG TGGAGTTGGA
GGTGCAGAGG CTATCAAACT AGCAATTGAA GACAGTTCTA TCAGTCTTGA CGAAGTTGAT
TACATAAATG CTCATGGAAC GAGTACATCA GCTAATGACA AAAATGAAAC TTCTGCAATT
AAATCTATTT TTAAAGACAG ATCTTACCTT ATTCCTGTAA GCTCTACTAA GTCGATGACT
GGTCATCTCC TAGGAGGTTC AGGAGGTATA GAAGCTGTTG CTTGTATACT TTCTTTGACA
CATAATTTTA TCCCTCCTAC AATTAACTAC GTCAATCCAG ATCCTGATTG TGATCTAGAT
TATGTACCAA ATAATGCAAG AGAAGCTCGA CTGGGAGTAG CTCTTTCTAA TTCTTTCGGC
TTTGGTGGTC ACAATGTTTG CCTTGCTTTT AGCAAAATGA ATTGA
 
Protein sequence
MPNFHRVVIT GIGAVTPIGN NIDEYLLSLQ KGANGVSGIT LFDPVDHPCK FAAEVKNLQS 
QNFIEAKESK RWDRFSQFGV IAAKQAFNDS GLEINEANAS RIGVIIGSGV GGLLTMESQA
QILSHKGPKR VSPFTVPMMI PNMATGLAAI ALGAKGPSSS VSTACAAGSN AIGDSFRLLQ
LGKADAMICG GAEASITPLG VAGFASAKAL SFRNESPQTA SRPFDAERDG FVIGEGSGIL
VLETLENAQK RDARIYGEII GYGTTCDAHH ITAPSPGGVG GAEAIKLAIE DSSISLDEVD
YINAHGTSTS ANDKNETSAI KSIFKDRSYL IPVSSTKSMT GHLLGGSGGI EAVACILSLT
HNFIPPTINY VNPDPDCDLD YVPNNAREAR LGVALSNSFG FGGHNVCLAF SKMN