Gene PMT9312_1678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1678 
Symbol 
ID3766500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1566729 
End bp1568141 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content31% 
IMG OID637798220 
Producthypothetical protein 
Protein accessionYP_398175 
Protein GI78780063 
COG category[S] Function unknown 
COG ID[COG4370] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03492] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.247818 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAACA AATATATAAA ACTTAAGCTT TTAGAAGGGT TTATAGGTAA TTTAGTATCA 
AAATTAAAGA AGGCGGCACC CAGATTCGAA CTGGGGATAA AGGATTTGCA ATCCTCTGCC
TTACCACTTG GCCATGCCGC CGAAAAAGAT TTAATGCAAT CTTTTTATGA TCTTAACAGT
AAGGTGACTC ATTCTATATT ATTTATATGC AATGGCCATG GAGAAGATGT AATCGCATCG
GAAATAATAA AAAGATTATT AAAGAAAATA AAAAATAAAA ATATCGAAGT CTTGCCTTTA
GTAGGAAATG GAGATGTATT TAATTCCATA AAATCAAAGA ATTTTTGTAA AATAGGCTAT
TTAAAAGAGC TACCTAGTGG AGGTTTTAGT AATCAAAGTC TGAAGGGATT TTTGCTTGAT
TTGTTTGCAG GATTTTTAAT AGATAATTTA AGAAATTTTT TAATTGTAAA ACAAAAGTCA
AAACATAACT GCAAAATTAT TGCAGTTGGA GATTTTCTAC CATTACTTTA TGCTTGGAGT
TCAGAATGCG AATTCAGTTT TATTGGCACT CCCAAAAGTG ACCATACTTG GAGTAGTGGA
CCAGGTTGGG CGTTAAGCGA TTTTTATCAT AAGTTGAAAG GTTCTGAATG GGACCCATGG
GAAATGTTTT TAATGACATC TCCAAGATGT AAAAATTTAA TTATGAGAGA TCAAATAACA
GCTAATAATT TGAATAGAAA AAATATTCAT GCAACATATT TTGGCAATCC AATGATGGAT
TTTGTTAATT CAAAAAATGA AAAGATATCC AATATTATTG CTTTCAAAAG GATAATTTTA
TTAGTTGGAA GTAGATACCC AGAAGCATTT AAAAATCTTG ATAATTTTCT TGATTGTTTG
CAAGATTTTG ATTTATCTAA GAATTTGGTA ATACTTTTGC CTTTGAGCAT TAATGCGAAT
GTGCTGCAAA TTCAAAGTTA TTTAAATAAA TACGGTTTTA AAAAACAAAG TAAAACTAAA
TTTTTGATTG ATCAAGATTC AGTATGGAAG AAGAAAGAAA AATATATATT GATTGGAAAA
GGCAAATTCA ATTTATGGGC CAATATGGCA GATATTGGCT TGTCTAATGC AGGAACTGCC
ACAGAGCAAA TTGCTGGCTT AGGAATACCT TCTCTGTCAC TTCCAGGATC TGGACCACAA
TTCACAAAAT CATTTGCAAA AAGGCAATCA AGATTATTAG GGGGAAGTGT TTTAGTTTGC
AAGAATAAAG AAATTCTTTT AAAACGTTTA AGTTTACTGT TGAGAGAAAA AGTTGCTAGG
TTAGAACAAT CGAAAATTGG TAAAAAAAGA ATGGGGAAAT CTGGCGCAAG TCAGAAAATT
GTAGATTCTA TAAACTCTCA TTTGTTATCT TAG
 
Protein sequence
MYNKYIKLKL LEGFIGNLVS KLKKAAPRFE LGIKDLQSSA LPLGHAAEKD LMQSFYDLNS 
KVTHSILFIC NGHGEDVIAS EIIKRLLKKI KNKNIEVLPL VGNGDVFNSI KSKNFCKIGY
LKELPSGGFS NQSLKGFLLD LFAGFLIDNL RNFLIVKQKS KHNCKIIAVG DFLPLLYAWS
SECEFSFIGT PKSDHTWSSG PGWALSDFYH KLKGSEWDPW EMFLMTSPRC KNLIMRDQIT
ANNLNRKNIH ATYFGNPMMD FVNSKNEKIS NIIAFKRIIL LVGSRYPEAF KNLDNFLDCL
QDFDLSKNLV ILLPLSINAN VLQIQSYLNK YGFKKQSKTK FLIDQDSVWK KKEKYILIGK
GKFNLWANMA DIGLSNAGTA TEQIAGLGIP SLSLPGSGPQ FTKSFAKRQS RLLGGSVLVC
KNKEILLKRL SLLLREKVAR LEQSKIGKKR MGKSGASQKI VDSINSHLLS