Gene PMT9312_1657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1657 
Symbol 
ID3766478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1544563 
End bp1545402 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content31% 
IMG OID637798198 
Productarogenate dehydrogenase 
Protein accessionYP_398154 
Protein GI78780042 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0287] Prephenate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTG GAATAGTAGG ATTAGGTTTA ATTGGGGGTT CTTTAGGATT AAAACTCCAA 
AGTATAAATC ATACAATTTA TGGAATAGCA AATAATGAAT TTAATGAAAA AAAAGCTAAG
GATAAAAAAC TTGCAAATTT TGTTAGTTGT GATCTGAGCT TATTAAAAAA ATGTGAGCTA
ATAATTTTGG CATTGCCTAT CAAAGATTTG ATCAGTCCGT CTCAAAAATT GGTATCATCA
ATACCTCAGG CAACAATACT AACTGATGTA GGATCTGTTA AAGAACCAAT TGTAAATACA
TGGGAAAATT TACATCCTCT ATTTATTGGA TCTCATCCAA TGGCAGGAAC AGAAAAAAAA
GGAGTTGATT CAGGTTTTGA AGGTCTTTTT AAAAATGCAA AATGGATTAT TACTCCAACA
CAAAATAGTG ATTTAAATGC AGTGAGAACA ATTTCCGAGA TCATAAAATC AATGGATTGT
GAAATTTGCC AAGCTTCGCC AAAAGAGCAT GATGAAGCAG TATCTCTAAT TTCTCATCTT
CCTATATTTT TAGCTTCTGC CCTAATTGAA ACTGCGCATA CAAAAAATAA TCAATCTTTA
TTAGATCTCA CGCAAAAATT AGCTGCTACA GGATTTGCTG ACACTTCGAG AGTTGGTGGC
GGCAATGAAC AACTAGGCCT AGATTTAGCT ATTAATAATC AGATTAATGT TTTAAATTCC
ATAAATAATT TTAAAAATAA GCTGAATATA CTGGAATCGC TTATTAAAGA AAAAAATTGG
GAGTTACTTT CTAACAAACT GGCTGAAGCA AAAGAAAACA GACAAAATTT TATAAACTAA
 
Protein sequence
MKIGIVGLGL IGGSLGLKLQ SINHTIYGIA NNEFNEKKAK DKKLANFVSC DLSLLKKCEL 
IILALPIKDL ISPSQKLVSS IPQATILTDV GSVKEPIVNT WENLHPLFIG SHPMAGTEKK
GVDSGFEGLF KNAKWIITPT QNSDLNAVRT ISEIIKSMDC EICQASPKEH DEAVSLISHL
PIFLASALIE TAHTKNNQSL LDLTQKLAAT GFADTSRVGG GNEQLGLDLA INNQINVLNS
INNFKNKLNI LESLIKEKNW ELLSNKLAEA KENRQNFIN