Gene PMT9312_1654 details

Gene Information

• Locus tag: PMT9312_1654
• Symbol: recA
• ID: 3766475
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9312
• Kingdom: Bacteria
• Replicon accession: NC_007577
• Strand: +
• Start bp: 1541645
• End bp: 1542742
• Gene Length: 1098 bp
• Protein Length: 365 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637798195
• Product: recombinase A
• Protein accession: YP_398151
• Protein GI: 78780039
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0468] RecA/RadA recombinase
• TIGRFAM ID: [TIGR02012] protein RecA

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCCTTG AAGAAAAGAA AAAACCCGAA TCAAAAGAAA AAGACAAGGC TTTAAGTCTT 
GTCTTAGGTC AAATAGAAAG AAATTTTGGA CGAGGATCAA TAATGAGACT TGGTGACGCC 
TCAAGAATGA AAGTAGAAAC AATATCTACT GGAGCGCTCA CCTTAGATTT AGCATTAGGA 
GGGGGCTACC CAAAAGGAAG AGTAGTAGAA GTTTACGGAC CAGAAAGTTC AGGAAAAACA 
ACATTAACGC TTCACGCGAT TGCGGAAGTC CAAAAGAATG GAGGAGTAGC TGCATTTGTA 
GATGCTGAGC ATGCACTCGA TCCAGTTTAT GCAGCCTCTT TAGGAGTTGA TGTTGAAAAT 
TTGTTAGTTT CACAACCAGA TACAGGTGAA ATGGCTCTGG AAATAGTTGA CCAACTTATA 
AGATCGAGTG CAGTAGATCT TGTAGTTGTT GACTCGGTCG CAGCACTAAC CCCAAGAGCC 
GAGATAGAAG GAGAGATGGG AGATCACGTA ATTGGCAGCC AAGCAAGGCT AATGAGCCAA 
GCGATGAGGA AAATAACAGG AAATATTGGG AAATCTGGAT GTACGGTAAT ATTCCTGAAT 
CAATTACGCC TAAAAATTGG CGTTACATAC GGCAATCCAG AAACAACCAC AGGAGGTAAT 
GCATTAAAAT TTTACGCCTC AGTGAGACTT GATATCAGAA GAATTCAAAC TCTTAAAAGA 
GGTACTGAAG AATATGGCAT AAGAGCAAAA GTAAAAGTAG CAAAAAATAA AGTTGCACCA 
CCATTTAGAA TTGCAGAGTT TGATATTCTC TTCGGAAAAG GTATTAGTAC AACAGGATGT 
TTATTAGATT TAGCAGAAGA GACTAATATC ATCATAAGGA GAGGTGCTTG GTATAGTTAT 
GAAGGAGAAA ATATTGGACA AGGAAGAGAT AATACAATTA TTTGGCTTGA TCAAAACTTA 
GAAATCAGGA ATAAAGTAGA ATCTATGGTT AAAGAGAAAT TAACAGAAGG AACTGAAGTC 
AGTTCTAATT CAATGAAAGC ATTAAATAGC AATCCTGCTA ATACAATCGC TGTTAATGAT 
ATAAAAACAG TAGCTTAG 

 

Protein sequence

MSLEEKKKPE SKEKDKALSL VLGQIERNFG RGSIMRLGDA SRMKVETIST GALTLDLALG 
GGYPKGRVVE VYGPESSGKT TLTLHAIAEV QKNGGVAAFV DAEHALDPVY AASLGVDVEN 
LLVSQPDTGE MALEIVDQLI RSSAVDLVVV DSVAALTPRA EIEGEMGDHV IGSQARLMSQ 
AMRKITGNIG KSGCTVIFLN QLRLKIGVTY GNPETTTGGN ALKFYASVRL DIRRIQTLKR 
GTEEYGIRAK VKVAKNKVAP PFRIAEFDIL FGKGISTTGC LLDLAEETNI IIRRGAWYSY 
EGENIGQGRD NTIIWLDQNL EIRNKVESMV KEKLTEGTEV SSNSMKALNS NPANTIAVND 
IKTVA