Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1650 |
Symbol | rplC |
ID | 3766470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | - |
Start bp | 1538149 |
End bp | 1538802 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637798190 |
Product | 50S ribosomal protein L3 |
Protein accession | YP_398147 |
Protein GI | 78780035 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0087] Ribosomal protein L3 |
TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTATAG GAATTTTAGG AAAGAAATTG GGTATGTCCC AACTTTTCGA TGACAAAGGT AATGCTGTAC CAGTTACGCT TATAGAAGCT GGTCCATGCC GTGTCACTCA ATTGAAAACT ACCACTTTGG ATGGTTATTC CGCCGTTCAG ATAGGATATG GATTGTCTAA AGACAAGCAT ATAAATAAAC CTGAAAAGGG ACATTTATTG AAGTCAGGTG AAGAACTTTT AAAGCACTTA AAAGAATATA GGGTTGAAGA AACTACATCT TATGAAATTG GAAATCAAAT AACAGTAAAA AACTTTGAGG TCGGCCAAAA AGTTGATATT AGTGGCAAAT CTATGGGTAG AGGTTTTGCT GGTTACCAGA AAAGGCATGG TTTTAGCAGA GGTCCTATGA GTCATGGCTC AAAAAATCAT AGAGCTCCAG GTTCTACAGG AGCAGGAACA ACCCCGGGCA GAATTTATCC TGGGAAAAGA ATGGCAGGAA GATATGGAGG TAAACAGATA ACTACAAAAG GTTTGTTAGT TCTAAAAATT GATGATCAGA AAAACTTGCT AGTGATAAAG GGTTCTGTTC CAGGTAAGCC TGGCTCAATT GTCAACATTA AGCCAAATAA TGTTGTAGGT AAAAAAGGAG GTCAAAAATC ATGA
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Protein sequence | MSIGILGKKL GMSQLFDDKG NAVPVTLIEA GPCRVTQLKT TTLDGYSAVQ IGYGLSKDKH INKPEKGHLL KSGEELLKHL KEYRVEETTS YEIGNQITVK NFEVGQKVDI SGKSMGRGFA GYQKRHGFSR GPMSHGSKNH RAPGSTGAGT TPGRIYPGKR MAGRYGGKQI TTKGLLVLKI DDQKNLLVIK GSVPGKPGSI VNIKPNNVVG KKGGQKS
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