Gene PMT9312_1650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1650 
SymbolrplC 
ID3766470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1538149 
End bp1538802 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content38% 
IMG OID637798190 
Product50S ribosomal protein L3 
Protein accessionYP_398147 
Protein GI78780035 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0087] Ribosomal protein L3 
TIGRFAM ID[TIGR03625] 50S ribosomal protein L3, bacterial 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTATAG GAATTTTAGG AAAGAAATTG GGTATGTCCC AACTTTTCGA TGACAAAGGT 
AATGCTGTAC CAGTTACGCT TATAGAAGCT GGTCCATGCC GTGTCACTCA ATTGAAAACT
ACCACTTTGG ATGGTTATTC CGCCGTTCAG ATAGGATATG GATTGTCTAA AGACAAGCAT
ATAAATAAAC CTGAAAAGGG ACATTTATTG AAGTCAGGTG AAGAACTTTT AAAGCACTTA
AAAGAATATA GGGTTGAAGA AACTACATCT TATGAAATTG GAAATCAAAT AACAGTAAAA
AACTTTGAGG TCGGCCAAAA AGTTGATATT AGTGGCAAAT CTATGGGTAG AGGTTTTGCT
GGTTACCAGA AAAGGCATGG TTTTAGCAGA GGTCCTATGA GTCATGGCTC AAAAAATCAT
AGAGCTCCAG GTTCTACAGG AGCAGGAACA ACCCCGGGCA GAATTTATCC TGGGAAAAGA
ATGGCAGGAA GATATGGAGG TAAACAGATA ACTACAAAAG GTTTGTTAGT TCTAAAAATT
GATGATCAGA AAAACTTGCT AGTGATAAAG GGTTCTGTTC CAGGTAAGCC TGGCTCAATT
GTCAACATTA AGCCAAATAA TGTTGTAGGT AAAAAAGGAG GTCAAAAATC ATGA
 
Protein sequence
MSIGILGKKL GMSQLFDDKG NAVPVTLIEA GPCRVTQLKT TTLDGYSAVQ IGYGLSKDKH 
INKPEKGHLL KSGEELLKHL KEYRVEETTS YEIGNQITVK NFEVGQKVDI SGKSMGRGFA
GYQKRHGFSR GPMSHGSKNH RAPGSTGAGT TPGRIYPGKR MAGRYGGKQI TTKGLLVLKI
DDQKNLLVIK GSVPGKPGSI VNIKPNNVVG KKGGQKS