Gene PMT9312_1649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1649 
SymbolrplD 
ID3766469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand- 
Start bp1537520 
End bp1538152 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content36% 
IMG OID637798189 
Product50S ribosomal protein L4 
Protein accessionYP_398146 
Protein GI78780034 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACAA TAGAAACTCT TAAGTGGGAT GGAAAAAAAT CCGGCGAAGT TAAACTTGAC 
TTAACAGTTG CTAAGGAAAC TTCTTCAGCA GACTTAATCC ATAGAGCAGT TCTTAGGCAA 
TTAGCAAATA AAAGACAAGG CACTGCATCA ACTTTGACAA GATCTGAAGT AAGAGGTGGT 
GGTAGAAAGC CATATAAACA GAAAGGTACA GGAAGAGCTC GTCAAGGTTC AATAAGAACC 
CCCTTAAGAC CTGGTGGTGG AATTATTTTT GGCCCTAAAC CGCGTTCTTA CAATCTTGAT 
ATGAATCGAA AGGAACGGAG GTTAGCTCTA AGAACAGCAC TTATGTCAAG AATATCTGAT 
GTGAAGGCTG TTGAAGATTT TGGATCTACC CTAAAGCAAC CTAAAACAAG TGACATTATC 
AATGGCCTTA CTCGATTAGG AATACAAAAA ACTGAAAAAG TTTTGGTTAT TCTTGATAGT 
CCCTCTGAGG TAATAAAAAA ATCCATAAAT AATATTGAAA AAGTAAAATT AATAGCCGCC 
GATCAACTAA ATGTATTTGA TATTCTCAAC GCTAATAAGT TGGTCATTGG TCAATCAGCA 
ATAAATAAAA TTAAGGAGGT TTATGCATCA TGA
 
Protein sequence
MTTIETLKWD GKKSGEVKLD LTVAKETSSA DLIHRAVLRQ LANKRQGTAS TLTRSEVRGG 
GRKPYKQKGT GRARQGSIRT PLRPGGGIIF GPKPRSYNLD MNRKERRLAL RTALMSRISD 
VKAVEDFGST LKQPKTSDII NGLTRLGIQK TEKVLVILDS PSEVIKKSIN NIEKVKLIAA 
DQLNVFDILN ANKLVIGQSA INKIKEVYAS