| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1644 |
|---|
| Symbol | rpsC |
|---|
| ID | 3766464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | - |
|---|
| Start bp | 1534916 |
|---|
| End bp | 1535647 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637798184 |
|---|
| Product | 30S ribosomal protein S3 |
|---|
| Protein accession | YP_398141 |
|---|
| Protein GI | 78780029 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0092] Ribosomal protein S3 |
|---|
| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGACATA AAATACATCC TTCTGGACTA AGATTAGGAA TTACACAAGA GCATCGTTCC
AAATGGTTTG CTACTTCCAA GACATATCCA ATTCTTCTCC AAGAAGATTT TAAAATTCGT
ACTTTCATAC AGAAAAAATA TGGTGCAGCA GGAATTAGCG ATGTATTAAT AGCTAGAAAA
GCTGATCAAC TTGAACTTGA ATTAAAAACT GCAAGACCAG GAGTGATTGT GGGAAGACAA
GGAAGTGGTA TTGAAGAATT AAGAGCTGGA ATTCAAAAAA CTATAGGAGA TAATACAAGG
CAAGTTAGAA TAAATGTTGT TGAAGTAGAG CGTGTTGACG CCGACGCTTT TTTACTGGCT
GAATATATCT CTCAACAACT GGAAAAAAGA GTTGCTTTTA GAAGAACTAT AAGGATGGCC
CTACAAAGGG CTCAAAGAGC TGGTGTCTTA GGTCTAAAAA TACAAGTAGG TGGAAGGTTA
AATGGCGCTG AAATTGCTAG AACAGAATGG ACTAGAGAAG GTAGAGTCCC TCTACATACC
TTGAGAGCTG AAATTGATTA TGCGACTCGT GAAGCTAACA CAACTTACGG TGTTTTAGGC
ATTAAAGTTT GGGTTTTTAA AGGAGAAGTT CTTCCTAAAG AAGAAAAAAC AATTCCAGTG
GGTGCAAGCC CCAAAAGGAA AGCTGGTAGA AGACCTCAGC AATTTGAGGA TCGTTCAAAT
GAGAATTCAT AG
|
|---|
| Protein sequence | MGHKIHPSGL RLGITQEHRS KWFATSKTYP ILLQEDFKIR TFIQKKYGAA GISDVLIARK
ADQLELELKT ARPGVIVGRQ GSGIEELRAG IQKTIGDNTR QVRINVVEVE RVDADAFLLA
EYISQQLEKR VAFRRTIRMA LQRAQRAGVL GLKIQVGGRL NGAEIARTEW TREGRVPLHT
LRAEIDYATR EANTTYGVLG IKVWVFKGEV LPKEEKTIPV GASPKRKAGR RPQQFEDRSN
ENS
|
|---|
| |