| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1641 |
|---|
| Symbol | rpsQ |
|---|
| ID | 3766461 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | - |
|---|
| Start bp | 1533930 |
|---|
| End bp | 1534196 |
|---|
| Gene Length | 267 bp |
|---|
| Protein Length | 88 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637798181 |
|---|
| Product | 30S ribosomal protein S17 |
|---|
| Protein accession | YP_398138 |
|---|
| Protein GI | 78780026 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0186] Ribosomal protein S17 |
|---|
| TIGRFAM ID | [TIGR03635] 30S ribosomal protein S17 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTTA AAGAAAGAAT TGGAACTGTT GTCAGCGACA AGATGGATAA GACGGTTGTT
GTTGCTGTTA TTAACAGATA TCCACATCCT ACTTATAAAA AAATTGTAAG TAGAACCACA
AGATATAAGG CACATGATCC TGAAAATACA TGTGCTTTAG GTGATCGAGT TAAGATTAGA
GAAACTAGAC CGCTTAGCGC TCATAAAAGA TGGGCAATAC AAGAGATCCT CAATAAAACT
AGTCAGACAA AGGAGGTTAA AAAATGA
|
|---|
| Protein sequence | MALKERIGTV VSDKMDKTVV VAVINRYPHP TYKKIVSRTT RYKAHDPENT CALGDRVKIR
ETRPLSAHKR WAIQEILNKT SQTKEVKK
|
|---|
| |