Gene PMT9312_1636 details

Gene Information

• Locus tag: PMT9312_1636
• Symbol: rplF
• ID: 3766456
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9312
• Kingdom: Bacteria
• Replicon accession: NC_007577
• Strand: -
• Start bp: 1531634
• End bp: 1532173
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 637798176
• Product: 50S ribosomal protein L6
• Protein accession: YP_398133
• Protein GI: 78780021
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAAGAA TCGGAAAAAC ACCAGTACTT ATTCCAGAAA AAGTTACAGT TGATTTGGAT 
GGATTAATAG TTACTGTAAA AGGTCCCAAG GGTGAGTTAA AACGTTTGAT GCCTGAGGGA 
GTTAGTTTTG ATAAAAAAGA TAATACTGTC GTAGTAAGTC CTACTACAAA TAAAATACAT 
TCAAGGCAAA GACATGGTTT ATGCAGAGCC TTAATTGCAA ATATGGTTGA AGGGGTTACT 
CAAGGTTTTT CAAAGAAACT TGAAATTGTA GGGGTTGGAT CCAGAGCACA AGTAAAAGGT 
AAAAATCTAG TTGTAAGTGC AGGATATAGT CATCCTGTAG AAATGATCCC CCCTGATGGT 
ATAACATACA AGGTTGAGAG TAATACAAAC GTTACCGTAT CTGGAATTGA TAAGGAGATT 
GTTGGCAATG AAGCAGCAAA AATCAGATCA ATTAGACCTC CAGAGCCATA TAAAGGAAAA 
GGAATTAAAT ACCATGATGA GAGAATTCTC AGAAAAGCTG GTAAATCTGG CAAAAAATAA 

 

Protein sequence

MSRIGKTPVL IPEKVTVDLD GLIVTVKGPK GELKRLMPEG VSFDKKDNTV VVSPTTNKIH 
SRQRHGLCRA LIANMVEGVT QGFSKKLEIV GVGSRAQVKG KNLVVSAGYS HPVEMIPPDG 
ITYKVESNTN VTVSGIDKEI VGNEAAKIRS IRPPEPYKGK GIKYHDERIL RKAGKSGKK