| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1628 |
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| Symbol | |
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| ID | 3766447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | - |
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| Start bp | 1526249 |
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| End bp | 1527184 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637798167 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_398124 |
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| Protein GI | 78780012 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAATACC AGATTGAAAG AATCGATCAT CAAATAGCAG ATGATCGCTC CCAAACAGGA
ACTTTTTTAA TTGGCCCTTT AGAAAGGGGA CAAGCTACAA CTTTGGGTAA TTCTCTTAGA
AGAGTCCTTA TGGGAGGACT TGAAGGGAGT GCAGTTACTG CAGTAAGAAT AGCAGGAATA
AATCACGAAT ATGCCACTAT CCCTGGAGTT AGAGAAGACG TTTTAGACAT TCTTCTCAAT
TGTAAGCAAT TATCAATTAA TAGTTCTAAT CCAGAGCTTG AAATTGGCAG GTTAGTAGCA
AGCGGTCCCT TGGATGTGAA GGCGAACGAT ATTCAATTTT CCTCTCAAGT TGAAATTGTT
GATGGCGAAA AACCGATTGC GACTATTCAA GAGGGTCATA ACCTAGAGTT GGAAATCCAT
GTTGAAAGAG GTGTTGGATA TAGACCTGTT GATCGTAAGA ATCAGGAGAC AACTGCTATT
GATTTACTTC AAATAGATGC TGTATTTATG CCAGTAAAGA GAGTTAATTT TTCAATTGAT
GAAACTGCTG TAGCAGAGGG TGGAACAGGT AGAGAAAGAT TAAAAATGGA AGTAGTAACA
GATGGCTCAA CAAGCCCTGA TGATGCTATC GCTGAAGCTG CAAACCAGTT AATAGAACTC
TTTCAACCTC TTGCGACTGT TACAATGGTT GAGGAAATTC CTGAAGAACC GGAACCATCT
CCTGAAGCTC AAATTCCTCT TGAGGAACTA AACTTGTCCG TTAGAGCATA TAATTGTTTA
AAAAGAGCTC AAGTTAACTC AGTTTCGGAC TTAATGGGTT TTAGTTATGA AGATCTTCTT
GAAATTAAGA ACTTTGGCTC AAAATCTGCG GATGAGGTTA TTGAAGCTCT TGAGCGTATA
GGAATTTCTA TTCCACAAAG CAGAACCTCT GTTTAA
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| Protein sequence | MQYQIERIDH QIADDRSQTG TFLIGPLERG QATTLGNSLR RVLMGGLEGS AVTAVRIAGI
NHEYATIPGV REDVLDILLN CKQLSINSSN PELEIGRLVA SGPLDVKAND IQFSSQVEIV
DGEKPIATIQ EGHNLELEIH VERGVGYRPV DRKNQETTAI DLLQIDAVFM PVKRVNFSID
ETAVAEGGTG RERLKMEVVT DGSTSPDDAI AEAANQLIEL FQPLATVTMV EEIPEEPEPS
PEAQIPLEEL NLSVRAYNCL KRAQVNSVSD LMGFSYEDLL EIKNFGSKSA DEVIEALERI
GISIPQSRTS V
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