Gene PMT9312_1621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1621 
Symbol 
ID3766440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1522104 
End bp1522661 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content35% 
IMG OID637798160 
ProductHNH endonuclease family protein 
Protein accessionYP_398117 
Protein GI78780005 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTTAT TGAAATATAC AGTTAGCATG ACATGTAAAT TCTATTTTGG CATGGGCCAG 
ACTCTAGTTT TAAATGCATC CTATGAACCT TTAAATATCA CTTCTTGGCG AAGAGCTGTT
ATTTTAATGA TCAAAGGTAA AGCAGAAAGC TTAGAGGAAG ATAAATCTTA TTCAATACAT
TGCGGCAGAA AATTACCTAC AGTTATAAGA CTTCGTTACT ACGTTAAGGT ACCTTTTAGG
GAGGTTTCTT TAACAAGAAA AAATATTCTT CTAAGAGATA ATAATGCCTG TCAATACTGT
AACTACAGAG GTAGTGATTT ATCAATAGAT CATGTTTTAC CGAGAAGCAG AGGTGGAACT
GATAACTGGG AAAATGTTAC TACAGCTTGT CTTAGATGTA ATGTACAAAA AGGTAACCGC
ACCCCAGAAG AGGCAAATAT ACCTTTAAAA CGAAAGCCAT ACCGTCCACT AAGTAATCTC
AATTTTGAGG CTACAAGACA AATTGACTCT GGCAGACATA AAGAATGGAG TAAATATGTA
ATAGGGGTTG CAATCTAA
 
Protein sequence
MRLLKYTVSM TCKFYFGMGQ TLVLNASYEP LNITSWRRAV ILMIKGKAES LEEDKSYSIH 
CGRKLPTVIR LRYYVKVPFR EVSLTRKNIL LRDNNACQYC NYRGSDLSID HVLPRSRGGT
DNWENVTTAC LRCNVQKGNR TPEEANIPLK RKPYRPLSNL NFEATRQIDS GRHKEWSKYV
IGVAI