Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1621 |
Symbol | |
ID | 3766440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 1522104 |
End bp | 1522661 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637798160 |
Product | HNH endonuclease family protein |
Protein accession | YP_398117 |
Protein GI | 78780005 |
COG category | [V] Defense mechanisms |
COG ID | [COG1403] Restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCTTAT TGAAATATAC AGTTAGCATG ACATGTAAAT TCTATTTTGG CATGGGCCAG ACTCTAGTTT TAAATGCATC CTATGAACCT TTAAATATCA CTTCTTGGCG AAGAGCTGTT ATTTTAATGA TCAAAGGTAA AGCAGAAAGC TTAGAGGAAG ATAAATCTTA TTCAATACAT TGCGGCAGAA AATTACCTAC AGTTATAAGA CTTCGTTACT ACGTTAAGGT ACCTTTTAGG GAGGTTTCTT TAACAAGAAA AAATATTCTT CTAAGAGATA ATAATGCCTG TCAATACTGT AACTACAGAG GTAGTGATTT ATCAATAGAT CATGTTTTAC CGAGAAGCAG AGGTGGAACT GATAACTGGG AAAATGTTAC TACAGCTTGT CTTAGATGTA ATGTACAAAA AGGTAACCGC ACCCCAGAAG AGGCAAATAT ACCTTTAAAA CGAAAGCCAT ACCGTCCACT AAGTAATCTC AATTTTGAGG CTACAAGACA AATTGACTCT GGCAGACATA AAGAATGGAG TAAATATGTA ATAGGGGTTG CAATCTAA
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Protein sequence | MRLLKYTVSM TCKFYFGMGQ TLVLNASYEP LNITSWRRAV ILMIKGKAES LEEDKSYSIH CGRKLPTVIR LRYYVKVPFR EVSLTRKNIL LRDNNACQYC NYRGSDLSID HVLPRSRGGT DNWENVTTAC LRCNVQKGNR TPEEANIPLK RKPYRPLSNL NFEATRQIDS GRHKEWSKYV IGVAI
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