Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1615 |
Symbol | psaB |
ID | 3766433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | - |
Start bp | 1512374 |
End bp | 1514602 |
Gene Length | 2229 bp |
Protein Length | 742 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637798153 |
Product | photosystem I P700 chlorophyll a apoprotein A2 |
Protein accession | YP_398111 |
Protein GI | 78779999 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01336] photosystem I core protein PsaB |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.687689 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACAA AATTTCCATC ATTTAACCAG GGTCTAGCTC AGGACCCGAC AACCCGCCGA ATATGGTACG GAATAGCAAC CGCTCATGAC TTTGAGAGTC ATGATGGAAT GACTGAAGAA AAGCTTTATC AGAAGCTTTT CTCTACCCAT TTTGGTCATC TAGCAATTAT CGCCCTTTGG GTAGCTGGTA ACCTATTCCA TGTAGCTTGG CAGGGTAACT TTGAGCAATT TGTACTTGAT CCAACTCATG TCCGTCCAAT TGCCCATGCA ATTTGGGATC CTCATTTTGG AGAAGGCATA ACAGAAGCAA TGACTCAAGC TGGAGCTAAT GGTCCAGTTA ACATAGCTTA CTCAGGCCTT TACCATTGGT GGTACACAAT CGGTATGAGA ACTAACGAGC AACTTTTTCA GGCTTCAATC TTTATGAGCA TTTTAGCTTG TTGGGTTTTA TTTGCTGGTT GGTTACATTT ACAGCCTAAA TTCAGACCTA CACTAGCTTG GTTTAAAAAT GCTGAGGCAC AGTTAAATCA TCATTTATCT GTCTTATTTG GTTTCAGTAG TATTGCTTGG ACAGGACATT TGGTTCATGT AGCAATTCCA GAATCTAGAG GTCAGCATGT TGGTTGGGAC AATTGGTTAA CAGTTCTTCC TCATCCTGCA GGATTAGCTC CTTTCTTTAC TCTAAATTGG GGTGCTTATG CACAAAATCC TGATTCTTTA GATCAAGTAT TCGGAACTGC AGAGGGTGCT GGAACAGCAA TCTTTACGTT CTTAGGAGGA CTACATCCTC AAAGTGAAGC TTTATGGCTT ACTGATATTG CACATCATCA TATTGCAATT GGTTGTGTTT TTGTAATTGC TGGCCATATG TATAGAAATA CTTTTGGCAT AGGACACAGC CTCAAAGAAA TTACTGAAGC TCATAACACT AGACATCCAA ATGACCCTCA TAAAGGTAGT TTCGGAATTA GTCATGATGG AATTTATGAG ACGGTTAACA ACTCTCTACA CTTTCAATTA GGTTTAGCTT TAGCATCTCT TGGTGTTGCT ACTTCTCTAG TTGCTCAACA TATGGGAGCT CTTCCTTCTT ATGCTTTTAT TGCTAGAGAT TACACTACAC AGTCAGCTCT ATATACTCAC CATCAATACA TAGCTATGTT CTTAATGGTG GGAGCTTTTG CTCATGGGGC TATTTTCTTT GTACGTGATT ATGATCCAGA AGTAAACAAA GATAATGTTT TAGCTAGAGT CTTAGGAACC AAAGAAGCAC TAATAAGTCA CTTAAGTTGG GTAACAATGT TACTGGGATT CCATACTCTT GGAATTTATG TTCATAACGA TGTAGTAGTA GCTTTTGGAA ATCCAGAAAA ACAAATTCTA ATTGAACCTG TATTTGCTCA GTTTGTTCAA GCTGCCCAAG GGAAAATGAT GTATGGCTTC GATGCTTTAT TATCTGATCC TACGAGTTCT GCAACTATAG CAGCAAACTC TATGCCAGGA AATCACTATT GGATGGATCT AATTAATAGA CAAGATGCTC TAAGCTCTTT CTTGCCTATT GGACCAGCAG ATTTCTTAGT TCATCATGCT ATAGCGCTAG GACTTCATAC AACAGCACTA ATCCTTATTA AAGGAGCATT AGATGCTAGA GGTACAAAAT TAATTCCTGA TAAAAAGGAT TTAGGTTATG CTTTCCCTTG CGATGGACCA GGTCGTGGAG GAACTTGTGA TAGTTCTTCA TGGGATGCTA TGTACCTTGC AATGTTCTGG GCATTAAATC TTATTGCATG GGTAACTTTC TACTGGCACT GGAAGCACCT AACAATTTGG CAAGGTAATA TGGCTCAATT TAATGAATCA GGTACCTACT TAATGGGTTG GTTTAGAGAT TATCTATGGC TCAATTCATC ACAGTTAATT AATGGATATA ATCCATTTGG TGTTAACTCC TTATCTCCTT GGGCTTGGAT GTTCCTATTT GGTCATTTAG TTTGGGCTAC TGGATTTATG TTCCTGATTT CATGGCGTGG TTATTGGCAA GAATTAATAG AAACATTAGT TTGGGCACAT CAGCGCACAC CAATAGCTAA CCTTGTAGGC TGGAGAGATA AGCCAGTTGC ACTTTCAATT GTTCAAGCTA GATTAGTTGG TTTGGCACAT TTCACGATAG GAAACATCCT TACATTTGGA GCCTTTGTGA TTGCATCAAC ATCAGGTAAG TTCGGTTAA
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Protein sequence | MATKFPSFNQ GLAQDPTTRR IWYGIATAHD FESHDGMTEE KLYQKLFSTH FGHLAIIALW VAGNLFHVAW QGNFEQFVLD PTHVRPIAHA IWDPHFGEGI TEAMTQAGAN GPVNIAYSGL YHWWYTIGMR TNEQLFQASI FMSILACWVL FAGWLHLQPK FRPTLAWFKN AEAQLNHHLS VLFGFSSIAW TGHLVHVAIP ESRGQHVGWD NWLTVLPHPA GLAPFFTLNW GAYAQNPDSL DQVFGTAEGA GTAIFTFLGG LHPQSEALWL TDIAHHHIAI GCVFVIAGHM YRNTFGIGHS LKEITEAHNT RHPNDPHKGS FGISHDGIYE TVNNSLHFQL GLALASLGVA TSLVAQHMGA LPSYAFIARD YTTQSALYTH HQYIAMFLMV GAFAHGAIFF VRDYDPEVNK DNVLARVLGT KEALISHLSW VTMLLGFHTL GIYVHNDVVV AFGNPEKQIL IEPVFAQFVQ AAQGKMMYGF DALLSDPTSS ATIAANSMPG NHYWMDLINR QDALSSFLPI GPADFLVHHA IALGLHTTAL ILIKGALDAR GTKLIPDKKD LGYAFPCDGP GRGGTCDSSS WDAMYLAMFW ALNLIAWVTF YWHWKHLTIW QGNMAQFNES GTYLMGWFRD YLWLNSSQLI NGYNPFGVNS LSPWAWMFLF GHLVWATGFM FLISWRGYWQ ELIETLVWAH QRTPIANLVG WRDKPVALSI VQARLVGLAH FTIGNILTFG AFVIASTSGK FG
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