Gene PMT9312_1606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1606 
Symbol 
ID3766424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1506301 
End bp1507194 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content34% 
IMG OID637798144 
Productlipoyl synthase 
Protein accessionYP_398102 
Protein GI78779990 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0320] Lipoate synthase 
TIGRFAM ID[TIGR00510] lipoate synthase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.217435 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACTAAAA ATCCTAATAG TTTAAGTTCA AAACCTGATT GGTTAAGAGT AAAAGCTCCG 
CAAGTTCAGA GAATTGGGGA TACTGCAAAT TTGTTAAATG ATTTAAATCT CAATACTGTA
TGTCAAGAAG CAAGCTGTCC AAATATTGGT GAATGTTTTG CTAGTGGAAC TGCGACTTTT
CTCATAATGG GTCCTGGCTG TACTAGGGCA TGTCCATATT GTGATATTGA TTTTGATAGA
TCTAAAAGGG AATTAGATCC AACAGAACCA TATCGTCTAG CCGAAGCAGT TTATAGAATG
AGGCTTAAAC ATGTTGTAAT TACATCAGTT AATAGAGACG ATCTTGAGGA TGGTGGCGCA
TCTCAATTTT TTGAATGTGT TTATCAAGTA AGAAAAAAAT CTCCTGAAAC TACGATCGAG
CTTTTAATTC CAGATTTTTG TGGCAACTGG AAAGCTCTTG AAAAAGTTCT TGATTCCAAT
CCAAACGTTT TAAACCACAA TATAGAAACT GTGCCATCGC TATATAAAAA AGTAAGGCCT
CAGGGTAAAT ATGAGAGAAC TCTAGAGTTA CTTAAAAGAA CTAGAGATTA TTCTCCTAAA
GTTTATACAA AGTCTGGCTT TATGCTTGGT TTAGGGGAAA AAGATGAGGA GGTTTTGAAT
CTTCTTGAGG ATTTAAGGAG TAATTACGTT GATATAGTTA CTATTGGTCA ATATTTATCT
CCTGGCCCTA ATCATTTACC TGTTCAAAGA TTTGTGAGTC CTTCAAAATT TAATTATTTT
AAAGTTTTTG GGGAAAAAGA TTTGGACTTT ATGCAAGTAG TTAGTTCTCC TCTAACTCGT
AGCAGTTACC ATGCAGAAGA GATTCAAAAA CTTATGAAAA AGTATCCAAG ATAG
 
Protein sequence
MTKNPNSLSS KPDWLRVKAP QVQRIGDTAN LLNDLNLNTV CQEASCPNIG ECFASGTATF 
LIMGPGCTRA CPYCDIDFDR SKRELDPTEP YRLAEAVYRM RLKHVVITSV NRDDLEDGGA
SQFFECVYQV RKKSPETTIE LLIPDFCGNW KALEKVLDSN PNVLNHNIET VPSLYKKVRP
QGKYERTLEL LKRTRDYSPK VYTKSGFMLG LGEKDEEVLN LLEDLRSNYV DIVTIGQYLS
PGPNHLPVQR FVSPSKFNYF KVFGEKDLDF MQVVSSPLTR SSYHAEEIQK LMKKYPR