| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1602 |
|---|
| Symbol | |
|---|
| ID | 3766420 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | - |
|---|
| Start bp | 1500359 |
|---|
| End bp | 1500829 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637798140 |
|---|
| Product | 30S ribosomal protein S7 |
|---|
| Protein accession | YP_398098 |
|---|
| Protein GI | 78779986 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0049] Ribosomal protein S7 |
|---|
| TIGRFAM ID | [TIGR01029] ribosomal protein S7, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.630942 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCACGTC GGAATGCAGC AGTAAAAAGA CCAGTTCTAC CTGATCCTCA ATTTAATAGT
CGTTTAGCTT CAATGATGAT TTCTCGATTG ATGAAACACG GTAAAAAATC TACAGCTCAA
AGAATATTGT CTGATGCTTT TTCTTTAATA AGTGAGAGAA CTGGAGGGGA TGCAGTCGAA
TTATTTGAAA CAGCGGTGAA AAATGCTACT CCCCTTGTTG AAGTAAGAGC TAGAAGAGTT
GGTGGTGCAA CTTACCAAGT GCCTATGGAA GTTCGCCAGG AAAGGGGCAC AGCTATGGCA
TTAAGATGGC TTGTTACATT CTCTCGTGCA CGAAATGGTA AAAGTATGTC CCAAAAACTA
GCTGGTGAGT TGATGGATGC AGCGAATGAA ACTGGTAGTT CAGTTAAAAA AAGAGAAGAT
ACCCATAAAA TGGCTGAAGC TAATAAAGCT TTTGCACATT ACCGATATTA A
|
|---|
| Protein sequence | MSRRNAAVKR PVLPDPQFNS RLASMMISRL MKHGKKSTAQ RILSDAFSLI SERTGGDAVE
LFETAVKNAT PLVEVRARRV GGATYQVPME VRQERGTAMA LRWLVTFSRA RNGKSMSQKL
AGELMDAANE TGSSVKKRED THKMAEANKA FAHYRY
|
|---|
| |