Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1592 |
Symbol | |
ID | 3766410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | - |
Start bp | 1489560 |
End bp | 1490786 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637798130 |
Product | L,L-diaminopimelate aminotransferase |
Protein accession | YP_398088 |
Protein GI | 78779976 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | [TIGR03542] LL-diaminopimelate aminotransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.518523 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGTTCAAG TAAACGAAAA TTATTTAAAA CTTAAAGCAG GCTATTTATT TCCTGAAATT GCGAAAAGGG TGAAAATATA TTCTCAATCA AATAAGAGTG CTGAAATTAT TAAGCTTGGC ATAGGAGATG TTACAGAACC ATTACCTAGA GCATGCATAG ATGCTATGAG TAAAGCTTTA GATGATATGG GAACAGCCGA AGGTTTTAGA GGTTATGGAC CAGAACAAGG TTATTCTTGG CTCAGAGAAA AAATATCTGA GCATGATTTT ATTTCGAGAG GCTGTCAAAT ATTACCTGAA GAAATCTTTG TGTCAGATGG GTCTAAATGC GATAGTAGCA ATATTTTAGA TATTCTTGGC AAAGATAATT CAATTGCTGT AACAGATCCT GTTTACCCTG TTTATGTAGA TAGTAACGTT ATGACAGGCA GAACTGGAGA TGCTCTTGAA AATGGAACTT ATCAAGGGTT GACATATCTT GCAATAAACG AGGGAAATAA CTTTCTGCCA GAACTACCTC AAAAAAAAGT TGATATTTTA TATCTTTGTT TTCCTAATAA TCCGACTGGA GCAACGATTA CTAAAGAAGA ATTGAAAAAG TGGGTTGACT ATGCTCTTCA AAACAAATCT TTAATACTTT TTGATGCGGC TTATGAAGCA TTTATTCAAG ATAATGATAT TCCACATTCA ATATATGAGA TTGAGGGAGC AAAGGATTGT GCTATTGAAT TTAGATCTTT TTCAAAGAAT GCAGGATTCA CTGGAGTTCG ATGTGCTTTT ACCGTAATAC CTAAAAATCT CAAAGGTTTG AGCTCAACAA ATGAGGAAAT AGACTTATGG CCTCTTTGGA ATAGGCGACA ATCTACAAAG TTCAATGGAG TAAGTTATGT GGTTCAGAGA GGAGCAGAGG CTGTTTATTC TCTTGAAGGG AAGAAAGAGG TAAGAGGTTT AATTGATTTT TATATGGAAA ATGCAAAAAT CATGAAAAAT AAACTTCAGA CTGCAGGATA TAAAGTTTAT GGTGGGGACA ATGCTCCTTA TATCTGGATT AAAGTTCCTG ATCAAATGAC ATCTTGGAAC TTTTTTGATT TCCTTCTTCA AAACGTTAGT GTTGTAGGTA CACCTGGGAG CGGATTTGGA TTATCAGGAG AGGGTTATTT TCGTTTGTCA GCATTTAACT CACGATCAAA CGTTCTTGAT GCAATGGAAA GAATAATTAA TATATAA
|
Protein sequence | MVQVNENYLK LKAGYLFPEI AKRVKIYSQS NKSAEIIKLG IGDVTEPLPR ACIDAMSKAL DDMGTAEGFR GYGPEQGYSW LREKISEHDF ISRGCQILPE EIFVSDGSKC DSSNILDILG KDNSIAVTDP VYPVYVDSNV MTGRTGDALE NGTYQGLTYL AINEGNNFLP ELPQKKVDIL YLCFPNNPTG ATITKEELKK WVDYALQNKS LILFDAAYEA FIQDNDIPHS IYEIEGAKDC AIEFRSFSKN AGFTGVRCAF TVIPKNLKGL SSTNEEIDLW PLWNRRQSTK FNGVSYVVQR GAEAVYSLEG KKEVRGLIDF YMENAKIMKN KLQTAGYKVY GGDNAPYIWI KVPDQMTSWN FFDFLLQNVS VVGTPGSGFG LSGEGYFRLS AFNSRSNVLD AMERIINI
|
| |