Gene PMT9312_1583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1583 
Symbol 
ID3766400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1478941 
End bp1480071 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content36% 
IMG OID637798120 
Producttrypsin-like serine protease 
Protein accessionYP_398079 
Protein GI78779967 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTTC TCAAGATTAA ATTAATTAAT TTAATCCAAA TATTCATTAT TGTTTGTTTT 
TGTTTAGTTA ATTTCTCTCA AAGAGCTGAA GTTTTAGCCT TGACTTCTTC TGATAGTCAC
AATTTCGTAT CATCTGCGGT TAGAAATGTT GGACCTGCAG TGGTAAAAAT TGATACTGAG
CGATTCGTTG AGAGGCAACA ATTTGATCCA ACTTTACTGG ACCCTTTATT GAGGGATTTG
CTTGGGGAGC AAGGAATTAC ACCTGAGAGA GAGAGAGGTC AAGGTTCTGG AGTAATTATT
AATGAGAATG GTTTGGTTCT TACTAATGCT CATGTCGTAG ACAGAGTTGA TGATGTTTTA
GTGACTTTGG CAGATGGAAG TATTTGCGAT GGCCAAGTTT TGGGAACAGA TGCAGTAACT
GACCTGGCTT TAGTAAAAAT TGAGGAATCT ACATTTTCTA GTTTTGCTCC CCTTGGAAAT
TCTGAAGATC TTCAAGTTGG AGATTGGGCA ATAGCACTAG GTACTCCCTA TGGTCTAGAA
AAAACAGTTA CCTTAGGAAT TGTAAGTAGT TTACATAGGG ATATTAATAG TCTAGGGTTT
TCAGATAAAA GGCTTGATCT TATTCAGACT GATGCGGCAA TAAATCCTGG GAATTCTGGA
GGACCACTTA TTAATTCTAA TGGTGAAGTA ATAGGAATCA ATACATTGGT AAGAAGTGGC
CCTGGAGCTG GTCTAGGTTT CGCAATACCT ATTAATCTAG CTAAAAGTGT TTCTGATCAG
CTTCTCAATA ATGGTGAAGT TATTCATCCA TATTTAGGGG TTCAATTAAT TTCTTTGAAT
CCTAGAATTG CTAAAGAACA TAATCAAGAC CCCAATTCAT TAGTCCAATT ACCTGAACGA
AATGGGGCTC TTATTCAATC AGTCATACCT AATAGTCCTG CTGAAAAAGC TGGTTTAAGA
AGAGGTGATT TAGTTATAGC AGCCGAAAAC ATCTCTATAG AAGAACCTAA AGCTTTGCTA
GATGAAGTTG AAAAAGCTCA GATAGGAAAA GTATTCCTTT TAAATGTTTT AAGAGATAAT
AAAGAGATAA AGATAAATAT CAAACCAGAA CCTCTACCAG GTTTGACATA A
 
Protein sequence
MKFLKIKLIN LIQIFIIVCF CLVNFSQRAE VLALTSSDSH NFVSSAVRNV GPAVVKIDTE 
RFVERQQFDP TLLDPLLRDL LGEQGITPER ERGQGSGVII NENGLVLTNA HVVDRVDDVL
VTLADGSICD GQVLGTDAVT DLALVKIEES TFSSFAPLGN SEDLQVGDWA IALGTPYGLE
KTVTLGIVSS LHRDINSLGF SDKRLDLIQT DAAINPGNSG GPLINSNGEV IGINTLVRSG
PGAGLGFAIP INLAKSVSDQ LLNNGEVIHP YLGVQLISLN PRIAKEHNQD PNSLVQLPER
NGALIQSVIP NSPAEKAGLR RGDLVIAAEN ISIEEPKALL DEVEKAQIGK VFLLNVLRDN
KEIKINIKPE PLPGLT