Gene PMT9312_1573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1573 
Symbol 
ID3766390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1463802 
End bp1464569 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content35% 
IMG OID637798110 
ProductHEAT repeat-containing PBS lyase 
Protein accessionYP_398069 
Protein GI78779957 
COG category[C] Energy production and conversion 
COG ID[COG1413] FOG: HEAT repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAAA ATAAGGATCC TAAAAAAGAA AGTCTAGCTG AAATTGCAGT TGATCCAGAT 
GTTTTAGCGA GAGAATTGGC TTTAGAGATT GAAATAGATC CTTTAGAGCA AATTGATGAA
GATGCTTTTT CAAAAGGTTT CAATATAACT CAAGAGTGCA ATGAAGCTTT AAAAATGCTT
GAAGGTAACA GAGAAGAAAG AATACAGGGG TTAAGAATAT TTTGTGAATA TAGAGATAAA
AGATCTTTTC CCCTTTTGTT ACCATTACTT GATCAACCTT GCCCTGTTGA AAGAATGAGT
GCGGTATATG CTTTAGGTCG TAATCCATGT CCTAGCGCAG TAAAGAAACT TGTCAGCCTT
TTGGAGACTG ATGATAATGC TTATGTTAGG AGGGCGACTG CATGGAGCTT AGCTAATTAT
GATGACCAAA TTGTTTTACA GCCATTAATT AGTGCTTTAA AGAACGATGT AGCTGCAGTA
AGGTTATGGT CATCTAGTTC TTTAGCTGAA ATTGGAAATG TTTCTCTGGA AAACGCTCAA
TTAGCAGCAG AACAGCTTTT AATAAGTTTA AAGATAGATA ATGAATCAGG TGTAAGAAGT
AATTGCATTT GGTCATTGTG TAGGTTGTAC GAAAAATTAA ACAATACATT TCAAGAAAGT
TTCGTTGATG AATGTACCAA GATAGCCCTT TTCGATAAAG AGCCATCCGT TATGGAAGAA
GCAAAAACTG CCTTGGATTC AATGGGGATG CAAGGTTTTT ATAATTAA
 
Protein sequence
MTKNKDPKKE SLAEIAVDPD VLARELALEI EIDPLEQIDE DAFSKGFNIT QECNEALKML 
EGNREERIQG LRIFCEYRDK RSFPLLLPLL DQPCPVERMS AVYALGRNPC PSAVKKLVSL
LETDDNAYVR RATAWSLANY DDQIVLQPLI SALKNDVAAV RLWSSSSLAE IGNVSLENAQ
LAAEQLLISL KIDNESGVRS NCIWSLCRLY EKLNNTFQES FVDECTKIAL FDKEPSVMEE
AKTALDSMGM QGFYN