Gene PMT9312_1536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1536 
Symbol 
ID3766353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1432118 
End bp1433095 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content33% 
IMG OID637798073 
Producthypothetical protein 
Protein accessionYP_398032 
Protein GI78779920 
COG category[R] General function prediction only 
COG ID[COG1253] Hemolysins and related proteins containing CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.456191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACCAA GTGTTTACGG TTTAATTTTA CTTATAATTA TCATTTTAAT TGGATCAGCA 
TGTTGTTCGG GAGTCGAAGC AGCTTTTTTA GCCGTAAATT CAATTAGAAT TATAGAAATA
GCCTCAAGAC AAAAGCCAAA AAGTTCCGCA AATCAACTCC TTAAACTTAG GAAACATCTT
GGAAGGACAT TAACTGTAAT TACTATTACT AATAATGGAT TTAACATCAT TGGAAGTCTA
ATTTTAGGTG TATACGGAGC ATTGGTAATA CATAGCAGTT ATGGCTTAAC CCTTTTTTCA
ATTGCTTTTT ATATACTAGT TGTCTTAGTG GGAGAAGTAC TACCCAAAGC TCTTGGTACA
AGATTTTCAG TCCAAATAGC ATTGTTATCC GTTCCAATCC TGAGAATATT AAATTCTTTA
ATGAAGCCGT TCTTAATATT AATAGAGCAA ATATTTCCAG TTATTACCGC AGAAAATGAA
ATTTCAACTG ATGAAGAAGA AATTAGGCAA ATGGCAAAAA TTGGTAGTCA GAAAGGTTTC
ATAGAAGCTG ATGAGGCAGC AATGATATTT AAGGTTTTTC AATTAAATGA TTTAAAAGCT
AAAGATTTAA TGATCCCAAG GGTATCAGCA CCCTGTCTTG ATGGGTCTTC GAATCTTGAT
GAAATTTCAA AACTAATAAT GTCTGACAAC TCTCCTTGGT GGGTTATTTT GGGAGATAAA
GTTGACAAAA TACAAGGGGT AGTTAAACGT GAAAGCATGT TAGCAGAATT AATAAATGGG
GGAAATAAAA AATCATTATC AGAAATCTGC GAACCTGTCG AATATATTCC CGAAATGATT
AAGGCAGATC AATTATTAAC AAGATTTGAC AAGAATCATA AAGGAGTAAA AGTAGTAGTA
GATGAATTTG GGGGATTCGT GGGAATTATT GGTGCGGAAG CTGTGTTAGC TGTATTAGCT
GGTTGGTGGA AAAAATAA
 
Protein sequence
MEPSVYGLIL LIIIILIGSA CCSGVEAAFL AVNSIRIIEI ASRQKPKSSA NQLLKLRKHL 
GRTLTVITIT NNGFNIIGSL ILGVYGALVI HSSYGLTLFS IAFYILVVLV GEVLPKALGT
RFSVQIALLS VPILRILNSL MKPFLILIEQ IFPVITAENE ISTDEEEIRQ MAKIGSQKGF
IEADEAAMIF KVFQLNDLKA KDLMIPRVSA PCLDGSSNLD EISKLIMSDN SPWWVILGDK
VDKIQGVVKR ESMLAELING GNKKSLSEIC EPVEYIPEMI KADQLLTRFD KNHKGVKVVV
DEFGGFVGII GAEAVLAVLA GWWKK